Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24500

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
2,550,912	-				+0.1
2,550,934	+				-0.7
2,550,970	+				+0.2
2,550,978	-		PGA1_c24480	0.10	+0.6
2,551,281	+				-0.2
2,551,281	+				-0.1
2,551,696	+				+0.4
2,551,746	-				-0.7
2,551,748	-				+1.1
2,551,752	+				+0.0
2,551,835	-				-0.6
2,551,846	+				-2.1
2,551,884	+				-0.4
2,551,885	-				+0.0
2,551,909	-				+0.7
2,551,909	-				-0.5
2,552,018	+		PGA1_c24500	0.15	+0.1
2,552,024	+		PGA1_c24500	0.16	-0.1
2,552,109	+		PGA1_c24500	0.28	-0.6
2,552,164	-		PGA1_c24500	0.35	-0.7
2,552,195	+		PGA1_c24500	0.40	-3.0
2,552,228	+		PGA1_c24500	0.44	+0.3
2,552,320	+		PGA1_c24500	0.57	-1.9
2,552,369	-		PGA1_c24500	0.64	-1.0
2,552,415	+		PGA1_c24500	0.70	-0.9
2,552,415	+		PGA1_c24500	0.70	-1.7
2,552,431	-		PGA1_c24500	0.72	-0.3
2,552,433	+		PGA1_c24500	0.73	-0.4
2,552,441	-		PGA1_c24500	0.74	-0.2
2,552,450	+		PGA1_c24500	0.75	-1.3
2,552,455	+		PGA1_c24500	0.76	-1.0
2,552,468	-		PGA1_c24500	0.78	+0.4
2,552,478	-		PGA1_c24500	0.79	-0.6
2,552,501	-		PGA1_c24500	0.82	+0.2
2,552,593	+				+0.5
2,552,602	-				-0.6
2,552,656	-				+0.0
2,552,739	+				+0.3
2,552,763	-				-2.2
2,552,766	-				-0.3
2,552,806	-				-0.6
2,552,864	+				-2.3
2,552,872	-				-0.3
2,552,872	-				+0.4
2,552,890	-				+0.2
2,552,941	+				-0.9
2,552,949	-				-0.1
2,552,949	-				-1.5
2,552,958	+				-0.1
2,553,018	+				+1.2
2,553,047	+				-0.6
2,553,047	+				-0.3
2,553,047	+				+0.4
2,553,104	-		PGA1_c24510	0.15	+0.0
2,553,141	-		PGA1_c24510	0.18	+0.7
2,553,284	+		PGA1_c24510	0.29	-0.1
2,553,433	+		PGA1_c24510	0.41	-1.5
2,553,438	+		PGA1_c24510	0.42	+0.6
2,553,441	-		PGA1_c24510	0.42	+0.8
2,553,457	+		PGA1_c24510	0.43	-0.0
2,553,541	-		PGA1_c24510	0.50	-1.7
2,553,607	+		PGA1_c24510	0.56	-0.5