Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24390

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
2,545,294	-		PGA1_c24380	0.40	+0.2
2,545,308	+		PGA1_c24380	0.42	-1.5
2,545,316	-		PGA1_c24380	0.44	-1.8
2,545,323	+		PGA1_c24380	0.45	-0.5
2,545,361	+		PGA1_c24380	0.51	+0.6
2,545,363	+		PGA1_c24380	0.51	-0.0
2,545,363	-		PGA1_c24380	0.51	+0.3
2,545,380	-		PGA1_c24380	0.54	-0.7
2,545,390	+		PGA1_c24380	0.56	-1.4
2,545,400	+		PGA1_c24380	0.57	-0.6
2,545,400	+		PGA1_c24380	0.57	+1.0
2,545,400	+		PGA1_c24380	0.57	-0.9
2,545,400	+		PGA1_c24380	0.57	-0.4
2,545,400	+		PGA1_c24380	0.57	+0.4
2,545,400	+		PGA1_c24380	0.57	-0.3
2,545,400	+		PGA1_c24380	0.57	-1.0
2,545,408	-		PGA1_c24380	0.59	+0.3
2,545,408	-		PGA1_c24380	0.59	+0.3
2,545,408	-		PGA1_c24380	0.59	-0.1
2,545,408	-		PGA1_c24380	0.59	+0.4
2,545,408	-		PGA1_c24380	0.59	+0.1
2,545,412	-		PGA1_c24380	0.59	-0.2
2,545,419	+		PGA1_c24380	0.60	+0.7
2,545,422	-		PGA1_c24380	0.61	-1.3
2,545,437	+		PGA1_c24380	0.63	+0.3
2,545,444	-		PGA1_c24380	0.64	+0.0
2,545,445	-		PGA1_c24380	0.65	-0.9
2,545,445	-		PGA1_c24380	0.65	-0.7
2,545,445	-		PGA1_c24380	0.65	-1.6
2,545,509	-		PGA1_c24380	0.75	-0.4
2,545,509	-		PGA1_c24380	0.75	+0.7
2,545,559	+		PGA1_c24380	0.83	-0.9
2,545,565	-		PGA1_c24380	0.84	-1.1
2,545,567	-		PGA1_c24380	0.84	-1.2
2,545,567	-		PGA1_c24380	0.84	-1.2
2,545,572	-		PGA1_c24380	0.85	+0.6
2,545,574	+		PGA1_c24380	0.85	+0.8
2,545,577	-		PGA1_c24380	0.86	+0.5
2,545,586	+		PGA1_c24380	0.87	+0.2
2,545,688	+				-0.9
2,545,689	+				+0.0
2,545,689	+				+0.9
2,545,689	+				-0.1
2,545,689	+				-1.0
2,545,697	-				-0.6
2,545,697	-				-0.8
2,545,716	+				+0.1
2,545,716	+				-0.1
2,545,732	-				+0.8
2,545,740	+				+0.5
2,545,748	-				-1.1
2,545,748	-				+0.5
2,545,748	-				+0.4
2,545,756	-				-1.1
2,545,781	+				-0.1
2,545,781	+				-0.5
2,545,836	+				+0.4
2,545,844	-				+0.6
2,545,873	+				-0.3
2,545,873	+				+0.0
2,545,873	+				-1.9
2,545,876	-				-1.4
2,545,878	+				+0.1
2,545,878	+				-0.4
2,545,878	+				+0.1
2,545,878	+				+0.6
2,545,878	+				+0.1
2,545,878	+				+2.4
2,545,878	+				-0.5
2,545,878	+				-0.3
2,545,878	+				+1.4
2,545,878	+				+1.4
2,545,878	+				-0.0
2,545,878	+				+0.8
2,545,878	+				+1.1
2,545,878	+				-0.6
2,545,878	+				-1.2
2,545,881	-				-1.0
2,545,886	-				+0.8
2,545,886	-				-0.5
2,545,886	-				+0.3
2,545,886	-				-0.2
2,545,886	-				-0.1
2,545,886	-				-0.1
2,545,886	-				+2.2
2,545,886	-				+0.5
2,545,886	-				-0.0
2,545,886	-				+0.4
2,545,886	-				-1.4
2,545,886	-				-0.5
2,545,886	-				+0.3
2,545,886	-				-0.7
2,545,886	-				+0.0
2,545,886	-				+0.8
2,545,886	-				+0.8
2,545,886	-				+0.7
2,545,914	+				-1.1
2,545,922	-				-0.1
2,545,930	-				-0.1
2,545,930	-				+0.3
2,545,930	-				-0.1
2,545,936	+				+0.6
2,545,939	-				-0.1
2,545,939	-				-0.5
2,545,941	+				-0.5
2,545,980	+				-1.8
2,545,984	-				+0.1
2,545,994	-				-1.1
2,546,076	+				+0.8
2,546,076	+				+0.4
2,546,076	+				-1.3
2,546,076	+				-0.6
2,546,076	+				+0.1
2,546,076	+				-0.4
2,546,076	+				+0.7
2,546,084	-				-0.1
2,546,084	-				-0.5
2,546,084	-				+0.9
2,546,084	-				+0.6
2,546,084	-				+0.1
2,546,084	-				+0.8
2,546,084	-				-0.1
2,546,084	-				-0.1
2,546,084	-				+0.4
2,546,121	+				+0.0
2,546,129	-				+1.0
2,546,145	-				-0.7
2,546,156	+				-1.2
2,546,189	+				+0.6
2,546,189	-				-0.5
2,546,290	+				-0.6
2,546,314	+		PGA1_c24390	0.10	-0.5
2,546,314	+		PGA1_c24390	0.10	-1.1
2,546,336	+		PGA1_c24390	0.16	+0.3
2,546,344	-		PGA1_c24390	0.18	-0.5
2,546,390	+		PGA1_c24390	0.29	-0.5
2,546,429	-		PGA1_c24390	0.39	-0.0
2,546,432	-		PGA1_c24390	0.40	-0.5
2,546,484	+		PGA1_c24390	0.54	-0.8
2,546,582	+		PGA1_c24390	0.79	-0.3
2,546,662	-				-0.1
2,546,679	-				-0.3
2,546,684	-				-0.3
2,546,700	+		PGA1_c24400	0.15	+0.2
2,546,708	-		PGA1_c24400	0.18	-1.4
2,546,764	+		PGA1_c24400	0.39	+0.2
2,546,774	+		PGA1_c24400	0.42	-0.2
2,546,816	-		PGA1_c24400	0.58	-0.2
2,546,826	+		PGA1_c24400	0.62	+0.5
2,546,855	+		PGA1_c24400	0.73	+0.4
2,546,863	-		PGA1_c24400	0.76	+1.2
2,546,863	-		PGA1_c24400	0.76	+0.8
2,546,863	-		PGA1_c24400	0.76	-0.2
2,546,863	-		PGA1_c24400	0.76	+0.9
2,546,863	-		PGA1_c24400	0.76	+0.9
2,546,871	-		PGA1_c24400	0.79	+0.6
2,546,876	-		PGA1_c24400	0.81	+1.1
2,546,876	-		PGA1_c24400	0.81	-0.1
2,546,921	-				+0.3
2,546,946	-				-1.4
2,546,959	+				+0.1
2,547,018	-				-0.5
2,547,018	-				-0.9
2,547,018	-				+0.3
2,547,048	+				-0.4
2,547,056	-		PGA1_c24410	0.11	-0.3
2,547,056	-		PGA1_c24410	0.11	+0.6
2,547,091	+		PGA1_c24410	0.24	-0.1
2,547,215	+		PGA1_c24410	0.68	+0.5
2,547,215	-		PGA1_c24410	0.68	+0.3
2,547,249	-		PGA1_c24410	0.80	-0.2
2,547,280	-				+0.0
2,547,324	+				+0.3
2,547,351	+				-1.2
2,547,359	-				+0.4
2,547,457	+				+1.0
2,547,465	-				-0.9
2,547,467	+				+0.6
2,547,514	+		PGA1_c24420	0.19	+2.1
2,547,579	-		PGA1_c24420	0.38	-0.2
2,547,629	+		PGA1_c24420	0.53	+0.8
2,547,640	+		PGA1_c24420	0.56	-0.9
2,547,658	+		PGA1_c24420	0.61	-0.6
2,547,658	+		PGA1_c24420	0.61	+0.3
2,547,658	+		PGA1_c24420	0.61	+0.1