Strain Fitness in Marinobacter adhaerens HP15 around HP15_2306

Experiment: m.b. Dimethyl Sulfoxide 9 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2305 and HP15_2306 are separated by 158 nucleotidesHP15_2306 and HP15_2307 are separated by 2 nucleotides HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263 _2305 HP15_2306: HP15_2306 - uracil phosphoribosyltransferase, at 2,428,422 to 2,429,060 _2306 HP15_2307: HP15_2307 - xanthine/uracil permease, at 2,429,063 to 2,430,319 _2307 Position (kb) 2428 2429 2430Strain fitness (log2 ratio) -2 -1 0 1at 2427.484 kb on - strand, within HP15_2305at 2427.509 kb on + strand, within HP15_2305at 2427.514 kb on + strand, within HP15_2305at 2427.579 kb on - strand, within HP15_2305at 2427.605 kb on + strand, within HP15_2305at 2427.674 kb on + strand, within HP15_2305at 2427.706 kb on - strand, within HP15_2305at 2427.765 kb on + strand, within HP15_2305at 2427.765 kb on + strand, within HP15_2305at 2427.773 kb on - strand, within HP15_2305at 2427.841 kb on - strand, within HP15_2305at 2427.853 kb on - strand, within HP15_2305at 2427.859 kb on + strand, within HP15_2305at 2427.859 kb on + strand, within HP15_2305at 2427.867 kb on - strand, within HP15_2305at 2427.869 kb on + strand, within HP15_2305at 2427.948 kb on + strand, within HP15_2305at 2427.969 kb on - strand, within HP15_2305at 2427.979 kb on + strand, within HP15_2305at 2427.979 kb on + strand, within HP15_2305at 2427.989 kb on + strand, within HP15_2305at 2428.064 kb on - strandat 2428.418 kb on + strandat 2428.426 kb on - strandat 2428.445 kb on - strandat 2428.533 kb on + strand, within HP15_2306at 2428.533 kb on + strand, within HP15_2306at 2428.591 kb on + strand, within HP15_2306at 2428.599 kb on - strand, within HP15_2306at 2428.619 kb on - strand, within HP15_2306at 2428.688 kb on - strand, within HP15_2306at 2428.966 kb on + strand, within HP15_2306at 2428.966 kb on + strand, within HP15_2306at 2429.188 kb on + strandat 2429.222 kb on - strand, within HP15_2307at 2429.374 kb on - strand, within HP15_2307at 2429.448 kb on + strand, within HP15_2307at 2429.480 kb on + strand, within HP15_2307at 2429.527 kb on - strand, within HP15_2307at 2429.763 kb on + strand, within HP15_2307at 2429.771 kb on - strand, within HP15_2307at 2429.776 kb on - strand, within HP15_2307at 2429.922 kb on + strand, within HP15_2307at 2429.965 kb on + strand, within HP15_2307at 2429.973 kb on - strand, within HP15_2307at 2430.002 kb on + strand, within HP15_2307at 2430.017 kb on + strand, within HP15_2307at 2430.040 kb on - strand, within HP15_2307

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 9 vol%
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2,427,484 - HP15_2305 0.65 +0.5
2,427,509 + HP15_2305 0.66 +1.2
2,427,514 + HP15_2305 0.67 -0.1
2,427,579 - HP15_2305 0.69 +0.2
2,427,605 + HP15_2305 0.71 +0.4
2,427,674 + HP15_2305 0.74 +0.3
2,427,706 - HP15_2305 0.75 -0.4
2,427,765 + HP15_2305 0.78 +0.8
2,427,765 + HP15_2305 0.78 +0.7
2,427,773 - HP15_2305 0.78 -0.0
2,427,841 - HP15_2305 0.81 +0.1
2,427,853 - HP15_2305 0.82 +1.0
2,427,859 + HP15_2305 0.82 +0.3
2,427,859 + HP15_2305 0.82 +0.3
2,427,867 - HP15_2305 0.82 +0.3
2,427,869 + HP15_2305 0.82 +0.0
2,427,948 + HP15_2305 0.86 +0.1
2,427,969 - HP15_2305 0.87 +0.6
2,427,979 + HP15_2305 0.87 -0.3
2,427,979 + HP15_2305 0.87 -0.2
2,427,989 + HP15_2305 0.88 +0.5
2,428,064 - +0.3
2,428,418 + -2.7
2,428,426 - -0.6
2,428,445 - -1.5
2,428,533 + HP15_2306 0.17 -1.0
2,428,533 + HP15_2306 0.17 -1.1
2,428,591 + HP15_2306 0.26 -1.1
2,428,599 - HP15_2306 0.28 -1.1
2,428,619 - HP15_2306 0.31 -0.2
2,428,688 - HP15_2306 0.42 -1.4
2,428,966 + HP15_2306 0.85 -0.9
2,428,966 + HP15_2306 0.85 -1.5
2,429,188 + -0.8
2,429,222 - HP15_2307 0.13 -0.4
2,429,374 - HP15_2307 0.25 -0.9
2,429,448 + HP15_2307 0.31 +0.7
2,429,480 + HP15_2307 0.33 +0.7
2,429,527 - HP15_2307 0.37 +0.5
2,429,763 + HP15_2307 0.56 -0.0
2,429,771 - HP15_2307 0.56 -0.3
2,429,776 - HP15_2307 0.57 -1.2
2,429,922 + HP15_2307 0.68 -0.5
2,429,965 + HP15_2307 0.72 -1.5
2,429,973 - HP15_2307 0.72 -2.3
2,430,002 + HP15_2307 0.75 -0.6
2,430,017 + HP15_2307 0.76 -0.3
2,430,040 - HP15_2307 0.78 -0.7

Or see this region's nucleotide sequence