Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0331 and DVU0333 are separated by 211 nucleotides DVU0333 and DVU0334 overlap by 44 nucleotides DVU0334 and DVU0335 are separated by 85 nucleotides
DVU0331: DVU0331 - sensory box histidine kinase, putative (TIGR), at 374,234 to 377,155
DVU0331
DVU0333: DVU0333 - hypothetical protein (TIGR), at 377,367 to 378,023
DVU0333
DVU0334: DVU0334 - D-alanine--D-alanine ligase (TIGR), at 377,980 to 378,891
DVU0334
DVU0335: DVU0335 - 3-deoxy-D-manno-octulosonic-acid transferase, putative (TIGR), at 378,977 to 380,569
DVU0335
Position (kb) 377
378
379 Strain fitness (log2 ratio) -2
-1
0
1
2 at 376.478 kb on - strand, within DVU0331 at 376.614 kb on + strand, within DVU0331 at 376.638 kb on - strand, within DVU0331 at 376.667 kb on + strand, within DVU0331 at 376.668 kb on - strand, within DVU0331 at 376.668 kb on - strand, within DVU0331 at 376.675 kb on + strand, within DVU0331 at 376.675 kb on + strand, within DVU0331 at 376.675 kb on + strand, within DVU0331 at 376.683 kb on - strand, within DVU0331 at 376.683 kb on - strand, within DVU0331 at 376.702 kb on + strand, within DVU0331 at 376.712 kb on + strand, within DVU0331 at 376.715 kb on - strand, within DVU0331 at 376.720 kb on - strand, within DVU0331 at 376.762 kb on + strand, within DVU0331 at 376.900 kb on - strand at 376.922 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.964 kb on - strand at 376.964 kb on - strand at 377.124 kb on + strand at 377.132 kb on - strand at 377.222 kb on + strand at 377.292 kb on + strand at 377.306 kb on - strand at 377.402 kb on + strand at 377.405 kb on - strand at 377.436 kb on + strand, within DVU0333 at 377.504 kb on + strand, within DVU0333 at 377.594 kb on - strand, within DVU0333 at 377.643 kb on + strand, within DVU0333 at 377.656 kb on + strand, within DVU0333 at 377.656 kb on - strand, within DVU0333 at 377.656 kb on - strand, within DVU0333 at 377.738 kb on - strand, within DVU0333 at 377.767 kb on - strand, within DVU0333 at 377.773 kb on + strand, within DVU0333 at 377.820 kb on - strand, within DVU0333
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 376,478 - DVU0331 0.77 -2.0 376,614 + DVU0331 0.81 +0.8 376,638 - DVU0331 0.82 -1.5 376,667 + DVU0331 0.83 +0.2 376,668 - DVU0331 0.83 -1.3 376,668 - DVU0331 0.83 -1.3 376,675 + DVU0331 0.84 -1.6 376,675 + DVU0331 0.84 -1.5 376,675 + DVU0331 0.84 +0.3 376,683 - DVU0331 0.84 -1.4 376,683 - DVU0331 0.84 -1.4 376,702 + DVU0331 0.84 -1.6 376,712 + DVU0331 0.85 -1.3 376,715 - DVU0331 0.85 -0.8 376,720 - DVU0331 0.85 +0.4 376,762 + DVU0331 0.87 -2.0 376,900 - -1.0 376,922 + -2.6 376,956 + +1.0 376,956 + -0.4 376,956 + -1.1 376,956 + -0.8 376,956 + +2.0 376,956 + -0.4 376,956 + -0.9 376,964 - +0.4 376,964 - -1.1 377,124 + -2.0 377,132 - +0.0 377,222 + +0.0 377,292 + -0.0 377,306 - +0.0 377,402 + +0.5 377,405 - -1.0 377,436 + DVU0333 0.11 -0.3 377,504 + DVU0333 0.21 -0.8 377,594 - DVU0333 0.35 -1.2 377,643 + DVU0333 0.42 +0.3 377,656 + DVU0333 0.44 +0.3 377,656 - DVU0333 0.44 -0.7 377,656 - DVU0333 0.44 -1.7 377,738 - DVU0333 0.56 +0.4 377,767 - DVU0333 0.61 +1.8 377,773 + DVU0333 0.62 +0.2 377,820 - DVU0333 0.69 -0.0
Or see this region's nucleotide sequence