Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rfbE and DVU0076 are separated by 17 nucleotides DVU0076 and DVU0077 are separated by 362 nucleotides
DVU0075: rfbE - aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR), at 91,765 to 92,898
rfbE
DVU0076: DVU0076 - glycosyl transferase, group 2 family protein (TIGR), at 92,916 to 93,953
DVU0076
DVU0077: DVU0077 - conserved hypothetical protein (TIGR), at 94,316 to 95,398
DVU0077
Position (kb) 92
93
94 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6 at 92.885 kb on - strand at 92.918 kb on - strand at 92.918 kb on - strand at 92.990 kb on + strand at 92.997 kb on + strand at 93.988 kb on + strand at 94.001 kb on - strand at 94.034 kb on - strand at 94.047 kb on + strand at 94.055 kb on - strand at 94.055 kb on - strand at 94.102 kb on - strand at 94.150 kb on - strand at 94.229 kb on - strand at 94.257 kb on - strand at 94.323 kb on + strand at 94.498 kb on - strand, within DVU0077 at 94.523 kb on + strand, within DVU0077 at 94.523 kb on + strand, within DVU0077 at 94.531 kb on - strand, within DVU0077 at 94.536 kb on - strand, within DVU0077 at 94.542 kb on + strand, within DVU0077 at 94.621 kb on + strand, within DVU0077 at 94.747 kb on + strand, within DVU0077 at 94.747 kb on + strand, within DVU0077 at 94.772 kb on + strand, within DVU0077 at 94.772 kb on + strand, within DVU0077 at 94.777 kb on + strand, within DVU0077 at 94.782 kb on + strand, within DVU0077 at 94.785 kb on - strand, within DVU0077 at 94.785 kb on - strand, within DVU0077 at 94.792 kb on + strand, within DVU0077 at 94.813 kb on - strand, within DVU0077 at 94.836 kb on + strand, within DVU0077 at 94.910 kb on + strand, within DVU0077
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 92,885 - -0.8 92,918 - +0.4 92,918 - -0.4 92,990 + -0.1 92,997 + +0.5 93,988 + -1.0 94,001 - +1.1 94,034 - -3.8 94,047 + -3.9 94,055 - -2.4 94,055 - +0.4 94,102 - -1.7 94,150 - -0.7 94,229 - +0.3 94,257 - +2.1 94,323 + +5.5 94,498 - DVU0077 0.17 +5.3 94,523 + DVU0077 0.19 +5.7 94,523 + DVU0077 0.19 +5.4 94,531 - DVU0077 0.20 +5.4 94,536 - DVU0077 0.20 +4.9 94,542 + DVU0077 0.21 +4.4 94,621 + DVU0077 0.28 +5.2 94,747 + DVU0077 0.40 +6.1 94,747 + DVU0077 0.40 +5.0 94,772 + DVU0077 0.42 +5.5 94,772 + DVU0077 0.42 +5.1 94,777 + DVU0077 0.43 +4.5 94,782 + DVU0077 0.43 +5.5 94,785 - DVU0077 0.43 +5.4 94,785 - DVU0077 0.43 +5.8 94,792 + DVU0077 0.44 +5.9 94,813 - DVU0077 0.46 +4.3 94,836 + DVU0077 0.48 +5.0 94,910 + DVU0077 0.55 +5.3
Or see this region's nucleotide sequence