Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2695 and DVU2696 overlap by 4 nucleotides DVU2696 and DVU2697 are separated by 12 nucleotides DVU2697 and DVU2698 are separated by 112 nucleotides DVU2698 and slt overlap by 1 nucleotides slt and DVU2700 overlap by 8 nucleotides
DVU2695: DVU2695 - conserved hypothetical protein (TIGR), at 2,806,807 to 2,807,223
DVU2695
DVU2696: DVU2696 - conserved hypothetical protein (TIGR), at 2,807,220 to 2,807,708
DVU2696
DVU2697: DVU2697 - hypothetical protein (TIGR), at 2,807,721 to 2,808,059
DVU2697
DVU2698: DVU2698 - lipoprotein, putative (TIGR), at 2,808,172 to 2,808,534
DVU2698
DVU2699: slt - transglycosylase SLT domain protein (TIGR), at 2,808,534 to 2,809,181
slt
DVU2700: DVU2700 - hypothetical protein (TIGR), at 2,809,174 to 2,809,593
DVU2700
Position (kb)
2808
2809 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2807.187 kb on + strand at 2807.187 kb on + strand at 2807.220 kb on - strand at 2807.229 kb on + strand at 2807.237 kb on - strand at 2807.278 kb on - strand, within DVU2696 at 2807.323 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.332 kb on - strand, within DVU2696 at 2807.410 kb on + strand, within DVU2696 at 2807.418 kb on - strand, within DVU2696 at 2807.437 kb on - strand, within DVU2696 at 2807.461 kb on - strand, within DVU2696 at 2807.598 kb on + strand, within DVU2696 at 2807.602 kb on + strand, within DVU2696 at 2807.672 kb on + strand at 2807.697 kb on - strand at 2807.853 kb on + strand, within DVU2697 at 2807.860 kb on - strand, within DVU2697 at 2807.862 kb on - strand, within DVU2697 at 2807.918 kb on - strand, within DVU2697 at 2808.006 kb on - strand, within DVU2697 at 2808.077 kb on - strand at 2808.238 kb on + strand, within DVU2698 at 2808.341 kb on - strand, within DVU2698 at 2808.345 kb on + strand, within DVU2698 at 2808.357 kb on + strand, within DVU2698 at 2808.357 kb on + strand, within DVU2698 at 2808.360 kb on - strand, within DVU2698 at 2808.403 kb on - strand, within DVU2698 at 2808.418 kb on - strand, within DVU2698 at 2808.420 kb on + strand, within DVU2698 at 2808.454 kb on + strand, within DVU2698 at 2808.457 kb on - strand, within DVU2698 at 2808.525 kb on - strand at 2808.607 kb on - strand, within slt at 2808.648 kb on + strand, within slt at 2808.656 kb on - strand, within slt at 2808.672 kb on + strand, within slt at 2808.723 kb on + strand, within slt at 2808.851 kb on - strand, within slt at 2808.893 kb on - strand, within slt at 2808.990 kb on - strand, within slt at 2809.047 kb on - strand, within slt at 2809.051 kb on - strand, within slt at 2809.208 kb on + strand at 2809.234 kb on - strand, within DVU2700 at 2809.318 kb on + strand, within DVU2700 at 2809.320 kb on + strand, within DVU2700 at 2809.326 kb on - strand, within DVU2700 at 2809.326 kb on - strand, within DVU2700 at 2809.333 kb on - strand, within DVU2700 at 2809.340 kb on - strand, within DVU2700 at 2809.344 kb on + strand, within DVU2700 at 2809.344 kb on + strand, within DVU2700 at 2809.344 kb on + strand, within DVU2700 at 2809.352 kb on - strand, within DVU2700 at 2809.392 kb on + strand, within DVU2700 at 2809.406 kb on - strand, within DVU2700 at 2809.489 kb on - strand, within DVU2700 at 2809.505 kb on - strand, within DVU2700
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 2,807,187 + -0.3 2,807,187 + +0.0 2,807,220 - -0.2 2,807,229 + -0.5 2,807,237 - -0.5 2,807,278 - DVU2696 0.12 +0.2 2,807,323 - DVU2696 0.21 +1.8 2,807,332 - DVU2696 0.23 -0.1 2,807,332 - DVU2696 0.23 +0.1 2,807,332 - DVU2696 0.23 -0.1 2,807,332 - DVU2696 0.23 -0.2 2,807,332 - DVU2696 0.23 -0.6 2,807,332 - DVU2696 0.23 -1.1 2,807,332 - DVU2696 0.23 -0.6 2,807,332 - DVU2696 0.23 -0.2 2,807,410 + DVU2696 0.39 -0.7 2,807,418 - DVU2696 0.40 -1.3 2,807,437 - DVU2696 0.44 -0.6 2,807,461 - DVU2696 0.49 -0.1 2,807,598 + DVU2696 0.77 -0.9 2,807,602 + DVU2696 0.78 +0.4 2,807,672 + -0.4 2,807,697 - +0.0 2,807,853 + DVU2697 0.39 -1.0 2,807,860 - DVU2697 0.41 -0.8 2,807,862 - DVU2697 0.42 +1.2 2,807,918 - DVU2697 0.58 +0.6 2,808,006 - DVU2697 0.84 -0.3 2,808,077 - -1.8 2,808,238 + DVU2698 0.18 -0.4 2,808,341 - DVU2698 0.47 -0.6 2,808,345 + DVU2698 0.48 -0.3 2,808,357 + DVU2698 0.51 -0.7 2,808,357 + DVU2698 0.51 -0.8 2,808,360 - DVU2698 0.52 -0.8 2,808,403 - DVU2698 0.64 -0.6 2,808,418 - DVU2698 0.68 -0.0 2,808,420 + DVU2698 0.68 -0.3 2,808,454 + DVU2698 0.78 -0.0 2,808,457 - DVU2698 0.79 +0.1 2,808,525 - -0.0 2,808,607 - slt DVU2699 0.11 +0.8 2,808,648 + slt DVU2699 0.18 -0.3 2,808,656 - slt DVU2699 0.19 +0.8 2,808,672 + slt DVU2699 0.21 +2.0 2,808,723 + slt DVU2699 0.29 -0.6 2,808,851 - slt DVU2699 0.49 +1.1 2,808,893 - slt DVU2699 0.55 -0.5 2,808,990 - slt DVU2699 0.70 -0.3 2,809,047 - slt DVU2699 0.79 -0.4 2,809,051 - slt DVU2699 0.80 -0.2 2,809,208 + -0.0 2,809,234 - DVU2700 0.14 -0.5 2,809,318 + DVU2700 0.34 -0.2 2,809,320 + DVU2700 0.35 +1.8 2,809,326 - DVU2700 0.36 -0.2 2,809,326 - DVU2700 0.36 -0.3 2,809,333 - DVU2700 0.38 +0.3 2,809,340 - DVU2700 0.40 -0.3 2,809,344 + DVU2700 0.40 +1.3 2,809,344 + DVU2700 0.40 -0.9 2,809,344 + DVU2700 0.40 +0.1 2,809,352 - DVU2700 0.42 +0.8 2,809,392 + DVU2700 0.52 +1.0 2,809,406 - DVU2700 0.55 +3.3 2,809,489 - DVU2700 0.75 +0.4 2,809,505 - DVU2700 0.79 +0.1
Or see this region's nucleotide sequence