Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0933 and DVU0934 overlap by 20 nucleotides DVU0934 and DVU0935 overlap by 4 nucleotides DVU0935 and DVU0936 are separated by 632 nucleotides DVU0936 and DVU0937 are separated by 13 nucleotides
DVU0933: DVU0933 - response regulator (TIGR), at 1,023,539 to 1,024,783
DVU0933
DVU0934: DVU0934 - hypothetical protein (TIGR), at 1,024,764 to 1,025,024
DVU0934
DVU0935: DVU0935 - methyl-accepting chemotaxis protein (TIGR), at 1,025,021 to 1,027,525
DVU0935
DVU0936: DVU0936 - hypothetical protein (TIGR), at 1,028,158 to 1,028,445
DVU0936
DVU0937: DVU0937 - hypothetical protein (TIGR), at 1,028,459 to 1,028,845
DVU0937
Position (kb)
1025
1026
1027
1028 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1024.038 kb on + strand, within DVU0933 at 1024.106 kb on + strand, within DVU0933 at 1024.228 kb on + strand, within DVU0933 at 1024.228 kb on + strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.351 kb on + strand, within DVU0933 at 1024.377 kb on + strand, within DVU0933 at 1024.390 kb on + strand, within DVU0933 at 1024.398 kb on - strand, within DVU0933 at 1024.452 kb on + strand, within DVU0933 at 1024.465 kb on + strand, within DVU0933 at 1024.539 kb on - strand, within DVU0933 at 1024.539 kb on - strand, within DVU0933 at 1024.680 kb on + strand at 1024.716 kb on - strand at 1024.821 kb on - strand, within DVU0934 at 1024.964 kb on + strand, within DVU0934 at 1024.964 kb on + strand, within DVU0934 at 1024.972 kb on - strand, within DVU0934 at 1025.097 kb on - strand at 1025.102 kb on - strand at 1025.157 kb on + strand at 1025.187 kb on + strand at 1025.326 kb on + strand, within DVU0935 at 1025.334 kb on - strand, within DVU0935 at 1025.404 kb on - strand, within DVU0935 at 1025.418 kb on - strand, within DVU0935 at 1025.485 kb on + strand, within DVU0935 at 1025.532 kb on + strand, within DVU0935 at 1025.540 kb on - strand, within DVU0935 at 1025.565 kb on + strand, within DVU0935 at 1025.583 kb on - strand, within DVU0935 at 1025.745 kb on + strand, within DVU0935 at 1025.814 kb on + strand, within DVU0935 at 1025.822 kb on - strand, within DVU0935 at 1026.058 kb on + strand, within DVU0935 at 1026.133 kb on + strand, within DVU0935 at 1026.133 kb on + strand, within DVU0935 at 1026.133 kb on + strand, within DVU0935 at 1026.140 kb on + strand, within DVU0935 at 1026.207 kb on - strand, within DVU0935 at 1026.237 kb on - strand, within DVU0935 at 1026.257 kb on - strand, within DVU0935 at 1026.299 kb on + strand, within DVU0935 at 1026.418 kb on + strand, within DVU0935 at 1026.460 kb on + strand, within DVU0935 at 1026.461 kb on - strand, within DVU0935 at 1026.473 kb on - strand, within DVU0935 at 1026.481 kb on + strand, within DVU0935 at 1026.500 kb on + strand, within DVU0935 at 1026.578 kb on + strand, within DVU0935 at 1026.696 kb on + strand, within DVU0935 at 1026.898 kb on + strand, within DVU0935 at 1026.906 kb on - strand, within DVU0935 at 1026.938 kb on + strand, within DVU0935 at 1026.946 kb on - strand, within DVU0935 at 1026.946 kb on - strand, within DVU0935 at 1026.946 kb on - strand, within DVU0935 at 1026.946 kb on - strand, within DVU0935 at 1026.972 kb on - strand, within DVU0935 at 1027.176 kb on + strand, within DVU0935 at 1027.223 kb on - strand, within DVU0935 at 1027.247 kb on - strand, within DVU0935 at 1027.265 kb on + strand, within DVU0935 at 1027.270 kb on + strand, within DVU0935 at 1027.270 kb on + strand, within DVU0935 at 1027.396 kb on + strand at 1027.412 kb on + strand at 1027.417 kb on + strand at 1027.420 kb on - strand at 1027.425 kb on - strand at 1027.450 kb on - strand at 1027.457 kb on - strand at 1027.462 kb on + strand at 1027.470 kb on - strand at 1027.552 kb on - strand at 1027.602 kb on + strand at 1027.734 kb on + strand at 1027.737 kb on - strand at 1027.737 kb on - strand at 1027.737 kb on - strand at 1027.861 kb on - strand at 1028.013 kb on + strand at 1028.021 kb on - strand at 1028.029 kb on + strand at 1028.150 kb on - strand at 1028.153 kb on + strand at 1028.189 kb on - strand, within DVU0936 at 1028.241 kb on - strand, within DVU0936 at 1028.302 kb on - strand, within DVU0936 at 1028.312 kb on - strand, within DVU0936 at 1028.312 kb on - strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.484 kb on - strand at 1028.516 kb on + strand, within DVU0937
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 1,024,038 + DVU0933 0.40 -0.0 1,024,106 + DVU0933 0.46 -0.6 1,024,228 + DVU0933 0.55 -0.2 1,024,228 + DVU0933 0.55 -0.3 1,024,236 - DVU0933 0.56 +0.1 1,024,236 - DVU0933 0.56 -0.5 1,024,236 - DVU0933 0.56 -0.9 1,024,236 - DVU0933 0.56 +0.3 1,024,351 + DVU0933 0.65 -0.5 1,024,377 + DVU0933 0.67 +0.7 1,024,390 + DVU0933 0.68 -0.6 1,024,398 - DVU0933 0.69 -0.6 1,024,452 + DVU0933 0.73 +3.2 1,024,465 + DVU0933 0.74 +0.8 1,024,539 - DVU0933 0.80 -0.2 1,024,539 - DVU0933 0.80 -0.4 1,024,680 + -0.4 1,024,716 - -0.1 1,024,821 - DVU0934 0.22 -0.4 1,024,964 + DVU0934 0.77 -0.3 1,024,964 + DVU0934 0.77 +1.6 1,024,972 - DVU0934 0.80 +1.5 1,025,097 - +0.1 1,025,102 - -0.2 1,025,157 + +0.0 1,025,187 + -0.6 1,025,326 + DVU0935 0.12 +0.1 1,025,334 - DVU0935 0.12 +0.0 1,025,404 - DVU0935 0.15 +0.2 1,025,418 - DVU0935 0.16 +0.9 1,025,485 + DVU0935 0.19 -0.3 1,025,532 + DVU0935 0.20 -1.0 1,025,540 - DVU0935 0.21 +0.3 1,025,565 + DVU0935 0.22 -2.2 1,025,583 - DVU0935 0.22 -0.3 1,025,745 + DVU0935 0.29 +0.0 1,025,814 + DVU0935 0.32 +2.9 1,025,822 - DVU0935 0.32 -0.7 1,026,058 + DVU0935 0.41 -0.2 1,026,133 + DVU0935 0.44 +0.1 1,026,133 + DVU0935 0.44 +1.9 1,026,133 + DVU0935 0.44 +0.4 1,026,140 + DVU0935 0.45 +0.4 1,026,207 - DVU0935 0.47 -0.0 1,026,237 - DVU0935 0.49 +1.9 1,026,257 - DVU0935 0.49 -0.5 1,026,299 + DVU0935 0.51 +0.4 1,026,418 + DVU0935 0.56 +0.8 1,026,460 + DVU0935 0.57 -0.2 1,026,461 - DVU0935 0.57 +0.6 1,026,473 - DVU0935 0.58 +0.4 1,026,481 + DVU0935 0.58 +0.3 1,026,500 + DVU0935 0.59 +0.9 1,026,578 + DVU0935 0.62 -0.0 1,026,696 + DVU0935 0.67 +0.2 1,026,898 + DVU0935 0.75 +0.0 1,026,906 - DVU0935 0.75 +1.1 1,026,938 + DVU0935 0.77 -0.1 1,026,946 - DVU0935 0.77 +0.3 1,026,946 - DVU0935 0.77 +0.3 1,026,946 - DVU0935 0.77 -1.4 1,026,946 - DVU0935 0.77 -0.4 1,026,972 - DVU0935 0.78 -0.1 1,027,176 + DVU0935 0.86 +0.3 1,027,223 - DVU0935 0.88 +0.3 1,027,247 - DVU0935 0.89 -0.5 1,027,265 + DVU0935 0.90 -1.3 1,027,270 + DVU0935 0.90 +1.2 1,027,270 + DVU0935 0.90 -0.3 1,027,396 + +0.5 1,027,412 + +0.1 1,027,417 + +2.1 1,027,420 - +0.5 1,027,425 - +0.9 1,027,450 - +0.5 1,027,457 - +0.0 1,027,462 + +0.0 1,027,470 - +0.7 1,027,552 - -1.4 1,027,602 + -1.0 1,027,734 + -1.3 1,027,737 - -0.4 1,027,737 - +2.4 1,027,737 - +0.6 1,027,861 - -0.1 1,028,013 + +0.6 1,028,021 - -0.4 1,028,029 + -0.9 1,028,150 - +0.4 1,028,153 + -1.8 1,028,189 - DVU0936 0.11 -2.1 1,028,241 - DVU0936 0.29 +0.1 1,028,302 - DVU0936 0.50 -1.9 1,028,312 - DVU0936 0.53 +0.4 1,028,312 - DVU0936 0.53 +0.6 1,028,314 + DVU0936 0.54 +1.3 1,028,314 + DVU0936 0.54 -0.2 1,028,314 + DVU0936 0.54 -0.1 1,028,484 - +0.4 1,028,516 + DVU0937 0.15 +0.3
Or see this region's nucleotide sequence