Strain Fitness in Pantoea sp. MT58 around IAI47_15335

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
3,229,454	-				-0.7
3,229,454	-				-0.2
3,229,454	-				+0.5
3,229,454	-				+1.1
3,229,454	-				+0.1
3,229,465	-				+0.4
3,229,466	-				-0.4
3,229,466	-				+0.7
3,229,466	-				-0.6
3,229,498	-				+1.3
3,229,949	-				-0.3
3,229,949	-				+0.3
3,229,955	+				+0.2
3,229,955	+				+0.6
3,229,955	+				-3.5
3,230,029	-		IAI47_15335	0.10	-0.2
3,230,029	-		IAI47_15335	0.10	-0.4
3,230,076	+		IAI47_15335	0.17	+0.4
3,230,077	-		IAI47_15335	0.17	-0.3
3,230,091	+		IAI47_15335	0.19	+0.0
3,230,091	+		IAI47_15335	0.19	-0.4
3,230,091	+		IAI47_15335	0.19	+0.1
3,230,091	+		IAI47_15335	0.19	+0.1
3,230,092	-		IAI47_15335	0.19	-1.2
3,230,113	+		IAI47_15335	0.22	-0.1
3,230,189	+		IAI47_15335	0.32	+0.0
3,230,189	+		IAI47_15335	0.32	+1.1
3,230,189	+		IAI47_15335	0.32	+3.6
3,230,189	+		IAI47_15335	0.32	-1.3
3,230,189	+		IAI47_15335	0.32	-0.2
3,230,190	-		IAI47_15335	0.32	-1.7
3,230,264	-		IAI47_15335	0.42	+0.6
3,230,264	-		IAI47_15335	0.42	+0.5
3,230,307	+		IAI47_15335	0.48	-0.3
3,230,308	-		IAI47_15335	0.48	+1.5
3,230,308	-		IAI47_15335	0.48	+1.0
3,230,308	-		IAI47_15335	0.48	-0.4
3,230,365	+		IAI47_15335	0.56	+0.5
3,230,397	+		IAI47_15335	0.60	-0.2
3,230,398	-		IAI47_15335	0.60	+1.2
3,230,398	-		IAI47_15335	0.60	-1.1
3,230,398	-		IAI47_15335	0.60	+0.7
3,230,482	-		IAI47_15335	0.72	+0.8
3,230,482	-		IAI47_15335	0.72	+0.1
3,230,508	+		IAI47_15335	0.75	+0.5
3,230,509	-		IAI47_15335	0.75	-0.0
3,230,509	-		IAI47_15335	0.75	+1.7
3,230,509	-		IAI47_15335	0.75	-0.2
3,230,553	+		IAI47_15335	0.81	+0.5
3,230,553	+		IAI47_15335	0.81	-0.4
3,230,553	+		IAI47_15335	0.81	+3.8
3,230,553	+		IAI47_15335	0.81	+2.2
3,230,553	+		IAI47_15335	0.81	+0.4
3,230,553	+		IAI47_15335	0.81	-0.8
3,230,553	+		IAI47_15335	0.81	+0.6
3,230,553	+		IAI47_15335	0.81	+0.6
3,230,553	+		IAI47_15335	0.81	-0.0
3,230,554	-		IAI47_15335	0.81	+1.3
3,230,554	-		IAI47_15335	0.81	-1.5
3,230,554	-		IAI47_15335	0.81	-0.0
3,230,554	-		IAI47_15335	0.81	+0.5
3,230,559	+		IAI47_15335	0.82	+0.2
3,230,559	+		IAI47_15335	0.82	-0.4
3,230,559	+		IAI47_15335	0.82	+0.0
3,230,559	+		IAI47_15335	0.82	+0.5
3,230,560	-		IAI47_15335	0.82	+1.6
3,230,560	-		IAI47_15335	0.82	+0.2
3,230,560	-		IAI47_15335	0.82	+1.1
3,230,560	-		IAI47_15335	0.82	+0.2
3,230,570	+		IAI47_15335	0.83	+0.4
3,230,571	-		IAI47_15335	0.84	+1.4
3,230,572	+		IAI47_15335	0.84	+1.1
3,230,572	+		IAI47_15335	0.84	-0.2
3,230,572	+		IAI47_15335	0.84	+0.8
3,230,572	+		IAI47_15335	0.84	+2.5
3,230,573	-		IAI47_15335	0.84	-0.3
3,230,573	-		IAI47_15335	0.84	+0.0
3,230,573	-		IAI47_15335	0.84	-2.1
3,230,573	-		IAI47_15335	0.84	+0.5
3,230,573	-		IAI47_15335	0.84	-1.4
3,230,585	+		IAI47_15335	0.86	+1.0
3,230,585	+		IAI47_15335	0.86	+2.2
3,230,586	-		IAI47_15335	0.86	+0.8
3,230,586	-		IAI47_15335	0.86	-0.2
3,230,621	+				-1.6
3,230,679	+				-0.6
3,230,696	+				-1.9
3,230,696	+				+0.1
3,230,696	+				-0.2
3,230,696	+				+0.5
3,230,697	-				-0.5
3,230,710	+				+0.0
3,230,710	+				+0.6
3,230,714	-				-0.3
3,230,742	+				-0.9
3,230,742	+				-1.5
3,230,743	-				+0.1
3,230,743	-				+0.3
3,230,748	+				-0.5
3,230,748	+				+1.3
3,230,749	-				-1.3
3,230,749	-				+0.4
3,230,770	+				+0.1
3,230,770	+				+0.2
3,230,770	+				+0.2
3,230,770	+				+1.0
3,230,770	+				-0.8
3,230,770	+				+0.1
3,230,770	+				+0.8
3,230,770	+				-0.8
3,230,770	+				-0.4
3,230,770	+				-0.4
3,230,770	+				-1.8
3,230,770	+				-1.3
3,230,771	-				+0.1
3,230,771	-				-1.7
3,230,771	-				+0.2
3,230,771	-				+0.6
3,230,771	-				-0.5
3,230,771	-				-1.1
3,230,771	-				-0.3
3,230,771	-				+1.3
3,230,771	-				+0.8
3,230,771	-				+1.5
3,230,799	+				-1.7
3,230,799	+				+0.4
3,230,799	+				+0.5
3,230,800	-				-0.7
3,230,800	-				+0.8
3,230,800	-				-0.0
3,230,800	-				+0.4
3,230,800	-				+0.4
3,230,840	+		IAI47_15340	0.14	+0.8
3,230,898	+		IAI47_15340	0.22	-0.0
3,230,898	+		IAI47_15340	0.22	+0.4
3,230,899	-		IAI47_15340	0.22	+0.6
3,230,899	-		IAI47_15340	0.22	+0.6
3,230,899	-		IAI47_15340	0.22	+0.5
3,230,899	-		IAI47_15340	0.22	+0.1
3,230,956	+		IAI47_15340	0.29	+0.4
3,230,957	-		IAI47_15340	0.29	+0.9
3,230,957	-		IAI47_15340	0.29	+0.3
3,230,957	-		IAI47_15340	0.29	+0.4
3,230,957	-		IAI47_15340	0.29	-1.6
3,230,957	-		IAI47_15340	0.29	+0.4
3,230,957	-		IAI47_15340	0.29	+0.2
3,231,013	-		IAI47_15340	0.37	-1.7
3,231,013	-		IAI47_15340	0.37	-1.1
3,231,052	-		IAI47_15340	0.42	-1.1
3,231,068	+		IAI47_15340	0.44	-0.5
3,231,069	-		IAI47_15340	0.44	-0.6
3,231,075	+		IAI47_15340	0.45	+1.0
3,231,075	+		IAI47_15340	0.45	-0.9
3,231,075	+		IAI47_15340	0.45	-1.0
3,231,075	+		IAI47_15340	0.45	+1.0
3,231,075	+		IAI47_15340	0.45	+0.3
3,231,075	+		IAI47_15340	0.45	+0.4
3,231,076	-		IAI47_15340	0.45	+0.2
3,231,077	+		IAI47_15340	0.45	-0.1
3,231,085	+		IAI47_15340	0.46	+0.4
3,231,169	+		IAI47_15340	0.58	-0.8
3,231,170	-		IAI47_15340	0.58	+0.6
3,231,190	-		IAI47_15340	0.60	-0.8
3,231,212	+		IAI47_15340	0.63	+0.4
3,231,234	+		IAI47_15340	0.66	-1.3
3,231,235	-		IAI47_15340	0.66	-1.7
3,231,240	-		IAI47_15340	0.67	-0.4
3,231,265	-		IAI47_15340	0.70	-1.8
3,231,288	-		IAI47_15340	0.73	-1.8
3,231,310	-		IAI47_15340	0.76	-0.3
3,231,317	+		IAI47_15340	0.77	+1.1
3,231,337	-		IAI47_15340	0.80	-0.1
3,231,348	-		IAI47_15340	0.81	+1.0
3,231,450	+				+0.4
3,231,451	-				-1.0
3,231,522	+				-1.2
3,231,522	+				+0.9
3,231,522	+				-0.0
3,231,523	-				-1.9
3,231,523	-				-0.6
3,231,524	+				+1.7
3,231,524	+				-0.0
3,231,524	+				+1.3
3,231,525	-				+0.1
3,231,525	-				-0.1
3,231,525	-				+0.6
3,231,525	-				-0.6
3,231,539	+				+0.5
3,231,548	+				-0.1
3,231,549	-				-0.4
3,231,549	-				-1.1
3,231,560	+				-0.5
3,231,560	+				+0.7
3,231,560	+				+0.7
3,231,560	+				-0.1
3,231,560	+				+0.0
3,231,560	+				-0.3
3,231,560	+				+0.6
3,231,560	+				+0.2
3,231,560	+				+0.4
3,231,560	+				+0.4
3,231,560	+				+1.3
3,231,560	+				+1.3
3,231,560	+				+0.7
3,231,560	+				+0.4
3,231,560	+				+0.7
3,231,561	-				-0.4
3,231,561	-				-2.8
3,231,561	-				-0.4
3,231,561	-				-0.5
3,231,561	-				-0.9
3,231,561	-				+0.4
3,231,561	-				-1.0
3,231,561	-				-0.9
3,231,561	-				-0.3
3,231,561	-				+1.0
3,231,561	-				-0.3
3,231,561	-				-0.4
3,231,561	-				+0.1
3,231,561	-				+0.4
3,231,561	-				-0.4
3,231,561	-				-0.1
3,231,561	-				-0.1
3,231,569	+				+1.1
3,231,569	+				-0.7
3,231,569	+				+0.9
3,231,577	+				+1.9
3,231,577	+				+0.8
3,231,577	+				-2.5
3,231,580	+				-0.7
3,231,581	-				+0.4