Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_78p00110
Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Nalidixic 0.016 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 10,893 | - | PGA1_78p00100 | 0.29 | -0.7 | |
| 10,934 | - | PGA1_78p00100 | 0.32 | -0.7 | |
| 11,230 | - | PGA1_78p00100 | 0.57 | +0.3 | |
| 11,250 | - | PGA1_78p00100 | 0.59 | -1.6 | |
| 11,287 | + | PGA1_78p00100 | 0.62 | +1.1 | |
| 11,295 | - | PGA1_78p00100 | 0.62 | +0.0 | |
| 11,603 | - | PGA1_78p00100 | 0.88 | -0.4 | |
| 11,864 | + | -0.7 | |||
| 12,020 | + | PGA1_78p00110 | 0.15 | -0.5 | |
| 12,047 | - | PGA1_78p00110 | 0.17 | -1.8 | |
| 12,159 | + | PGA1_78p00110 | 0.26 | -0.6 | |
| 12,287 | - | PGA1_78p00110 | 0.37 | -1.0 | |
| 12,402 | + | PGA1_78p00110 | 0.46 | +0.2 | |
| 12,459 | - | PGA1_78p00110 | 0.51 | +0.3 | |
| 12,511 | + | PGA1_78p00110 | 0.55 | -1.0 | |
| 12,958 | - | -0.4 | |||
| 12,958 | - | -0.6 | |||
| 12,958 | - | -0.6 | |||
| 13,044 | - | -0.2 | |||
| 13,136 | - | -1.7 | |||
| 13,222 | + | +0.1 | |||
| 13,306 | + | -0.0 | |||
| 13,306 | + | +0.1 | |||
| 13,311 | + | +0.3 | |||
| 13,314 | + | -0.7 | |||
| 13,461 | - | -0.2 | |||
| 13,484 | + | +1.1 | |||
| 13,510 | - | -0.8 | |||
| 13,515 | - | -0.5 | |||
| 13,537 | - | -0.1 | |||
| 13,547 | - | +0.2 | |||
| 13,574 | - | -1.2 | |||
| 13,602 | - | -0.7 | |||
| 13,788 | - | +0.4 | |||
| 13,802 | + | +1.0 | |||
| 13,852 | - | +0.4 |
Or see this region's nucleotide sequence