Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21990

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
2,279,879	-				+0.5
2,279,906	+				+0.4
2,279,906	+				+1.2
2,279,912	+				-0.5
2,279,912	+				+0.9
2,279,912	+				+0.4
2,279,912	+				+0.6
2,279,920	-				+1.0
2,279,920	-				-0.2
2,279,938	+				-1.3
2,279,938	+				-0.4
2,279,986	+				-2.0
2,280,053	+		PGA1_c21990	0.12	+0.5
2,280,179	+		PGA1_c21990	0.30	-1.3
2,280,214	-		PGA1_c21990	0.35	-1.8
2,280,233	+		PGA1_c21990	0.38	-0.2
2,280,312	-		PGA1_c21990	0.50	-0.8
2,280,336	-		PGA1_c21990	0.53	-1.1
2,280,338	-		PGA1_c21990	0.53	-0.9
2,280,423	+		PGA1_c21990	0.66	-0.3
2,280,543	+		PGA1_c21990	0.83	+0.7
2,280,661	-				+0.7
2,280,669	+				+0.7
2,280,677	-				+0.4
2,280,724	+				-0.5
2,280,839	-				-0.3
2,280,849	-				+0.0
2,280,911	+		PGA1_c22000	0.16	-0.0
2,280,919	-		PGA1_c22000	0.17	-0.9
2,280,937	+		PGA1_c22000	0.20	-0.1
2,280,987	+		PGA1_c22000	0.28	-0.5
2,281,002	+		PGA1_c22000	0.30	-0.8
2,281,010	-		PGA1_c22000	0.31	-0.3
2,281,055	-		PGA1_c22000	0.39	+0.8
2,281,055	-		PGA1_c22000	0.39	+0.4
2,281,091	+		PGA1_c22000	0.44	+0.0
2,281,091	+		PGA1_c22000	0.44	+0.6
2,281,091	+		PGA1_c22000	0.44	-0.0
2,281,091	+		PGA1_c22000	0.44	-1.4
2,281,099	-		PGA1_c22000	0.46	-1.0
2,281,099	-		PGA1_c22000	0.46	-1.5
2,281,099	-		PGA1_c22000	0.46	+0.1
2,281,115	+		PGA1_c22000	0.48	+0.3
2,281,273	+		PGA1_c22000	0.74	+0.3
2,281,273	+		PGA1_c22000	0.74	-0.1
2,281,273	+		PGA1_c22000	0.74	-0.1
2,281,273	+		PGA1_c22000	0.74	-1.1
2,281,273	+		PGA1_c22000	0.74	-0.4
2,281,273	+		PGA1_c22000	0.74	+0.9
2,281,273	+		PGA1_c22000	0.74	-0.3
2,281,273	+		PGA1_c22000	0.74	-0.1
2,281,273	+		PGA1_c22000	0.74	+1.0
2,281,273	+		PGA1_c22000	0.74	+0.9
2,281,281	-		PGA1_c22000	0.75	-0.9
2,281,281	-		PGA1_c22000	0.75	-0.0
2,281,281	-		PGA1_c22000	0.75	-1.3
2,281,281	-		PGA1_c22000	0.75	-0.4
2,281,281	-		PGA1_c22000	0.75	+0.3
2,281,281	-		PGA1_c22000	0.75	+0.3
2,281,281	-		PGA1_c22000	0.75	-1.1
2,281,298	+		PGA1_c22000	0.78	-1.5
2,281,372	-		PGA1_c22000	0.89	-0.1
2,281,475	+				+1.4
2,281,523	-				+0.2
2,281,523	-				-2.0