Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20960

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
2,172,739	-		PGA1_c20940	0.75	-0.8
2,173,073	+				+0.1
2,173,117	+				-0.8
2,173,196	-		PGA1_c20950	0.10	+0.4
2,173,207	+		PGA1_c20950	0.12	-0.1
2,173,233	+		PGA1_c20950	0.17	-0.1
2,173,270	+		PGA1_c20950	0.23	+1.0
2,173,270	+		PGA1_c20950	0.23	-0.6
2,173,270	+		PGA1_c20950	0.23	+0.6
2,173,270	+		PGA1_c20950	0.23	-0.0
2,173,278	-		PGA1_c20950	0.25	+0.6
2,173,278	-		PGA1_c20950	0.25	+0.1
2,173,389	-		PGA1_c20950	0.44	-0.9
2,173,444	+		PGA1_c20950	0.54	+0.3
2,173,520	-		PGA1_c20950	0.67	+1.2
2,173,611	-		PGA1_c20950	0.83	-0.3
2,173,694	+				+0.6
2,173,694	+				+0.8
2,173,694	+				+0.6
2,173,702	-				-0.7
2,173,791	-				-1.7
2,173,843	-		PGA1_c20960	0.13	+0.1
2,174,005	-		PGA1_c20960	0.31	-0.7
2,174,010	-		PGA1_c20960	0.32	+1.2
2,174,020	-		PGA1_c20960	0.33	+0.0
2,174,086	+		PGA1_c20960	0.40	+0.8
2,174,103	+		PGA1_c20960	0.42	-0.9
2,174,106	-		PGA1_c20960	0.42	+0.2
2,174,111	-		PGA1_c20960	0.43	+0.1
2,174,117	+		PGA1_c20960	0.44	-0.9
2,174,177	-		PGA1_c20960	0.50	-0.8
2,174,187	-		PGA1_c20960	0.51	-1.5
2,174,197	+		PGA1_c20960	0.53	-0.8
2,174,215	-		PGA1_c20960	0.55	+0.0
2,174,239	-		PGA1_c20960	0.57	+1.3
2,174,244	+		PGA1_c20960	0.58	-0.5
2,174,298	+		PGA1_c20960	0.64	-1.4
2,174,306	-		PGA1_c20960	0.65	-1.0
2,174,314	-		PGA1_c20960	0.66	-0.1
2,174,374	-		PGA1_c20960	0.72	-0.4
2,174,424	+		PGA1_c20960	0.78	-0.4
2,174,502	+		PGA1_c20960	0.87	-0.5
2,174,587	+				+1.5
2,174,587	+				-0.5
2,174,590	-				-1.7
2,174,590	-				-0.3
2,174,590	-				-0.1
2,174,592	+				+0.3
2,174,595	-				-0.2
2,174,595	-				-0.1
2,174,597	+				+0.7
2,174,597	+				+0.6
2,174,600	-				-2.0
2,174,687	+				-0.5
2,174,761	-				-0.6
2,174,761	-				-0.3
2,174,804	+				-0.4
2,174,809	+				-1.2
2,174,817	-				-0.5
2,174,829	+				+0.5
2,174,894	+				-0.2
2,174,928	+				-0.2
2,174,928	+				+0.8
2,174,936	-				-1.2
2,174,936	-				+0.4
2,175,036	+				-0.3
2,175,036	+				-0.8
2,175,036	+				-1.0
2,175,036	+				-0.4
2,175,036	+				-0.2
2,175,036	+				-1.1
2,175,036	+				-0.4
2,175,036	+				+0.2
2,175,036	+				-1.0
2,175,044	-				-1.3
2,175,044	-				+0.1
2,175,044	-				-0.8
2,175,044	-				+0.2
2,175,044	-				-1.1
2,175,044	-				+0.8
2,175,100	-				-0.5
2,175,168	-				+0.8
2,175,188	-				+0.1
2,175,201	+				-1.4
2,175,241	-				+0.6
2,175,279	-		PGA1_c20970	0.13	-0.6
2,175,279	-		PGA1_c20970	0.13	+0.1
2,175,279	-		PGA1_c20970	0.13	+0.9
2,175,368	-		PGA1_c20970	0.25	+0.2
2,175,393	-		PGA1_c20970	0.28	-0.0
2,175,397	-		PGA1_c20970	0.29	-0.4
2,175,415	-		PGA1_c20970	0.31	-0.3
2,175,425	-		PGA1_c20970	0.32	-1.4
2,175,451	+		PGA1_c20970	0.36	+0.8
2,175,459	-		PGA1_c20970	0.37	+1.6
2,175,459	-		PGA1_c20970	0.37	+0.3
2,175,461	+		PGA1_c20970	0.37	+0.4
2,175,469	-		PGA1_c20970	0.38	-0.5
2,175,598	+		PGA1_c20970	0.54	-1.8
2,175,604	-		PGA1_c20970	0.55	-0.4