Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ung and DVU0394 are separated by 239 nucleotides DVU0394 and hit are separated by 227 nucleotides hit and hup-1 are separated by 27 nucleotides
DVU0393: ung - uracil-DNA glycosylase (TIGR), at 441,764 to 442,501
ung
DVU0394: DVU0394 - radical SAM domain protein (TIGR), at 442,741 to 443,763
DVU0394
DVU0395: hit - HIT family protein (TIGR), at 443,991 to 444,410
hit
DVU0396: hup-1 - DNA-binding protein HU (TIGR), at 444,438 to 444,725
hup-1
Position (kb) 442
443
444 Strain fitness (log2 ratio) -2
-1
0
1
2 at 441.877 kb on + strand, within ung at 441.898 kb on + strand, within ung at 441.903 kb on + strand, within ung at 441.941 kb on - strand, within ung at 441.955 kb on - strand, within ung at 441.985 kb on - strand, within ung at 441.985 kb on - strand, within ung at 442.073 kb on - strand, within ung at 442.159 kb on + strand, within ung at 442.164 kb on + strand, within ung at 442.202 kb on - strand, within ung at 442.229 kb on - strand, within ung at 442.238 kb on + strand, within ung at 442.245 kb on + strand, within ung at 442.285 kb on + strand, within ung at 442.313 kb on - strand, within ung at 442.364 kb on - strand, within ung at 442.378 kb on - strand, within ung at 442.394 kb on + strand, within ung at 442.401 kb on + strand, within ung at 442.453 kb on + strand at 442.547 kb on + strand at 442.629 kb on + strand at 442.629 kb on + strand at 442.631 kb on + strand at 442.631 kb on + strand at 442.637 kb on - strand at 442.723 kb on - strand at 442.725 kb on + strand at 443.812 kb on - strand at 444.050 kb on + strand, within hit at 444.050 kb on + strand, within hit at 444.053 kb on - strand, within hit at 444.058 kb on - strand, within hit at 444.176 kb on + strand, within hit at 444.234 kb on + strand, within hit at 444.242 kb on - strand, within hit at 444.242 kb on - strand, within hit at 444.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 441,877 + ung DVU0393 0.15 -0.7 441,898 + ung DVU0393 0.18 -0.2 441,903 + ung DVU0393 0.19 +0.1 441,941 - ung DVU0393 0.24 -0.3 441,955 - ung DVU0393 0.26 -2.0 441,985 - ung DVU0393 0.30 +0.4 441,985 - ung DVU0393 0.30 +0.6 442,073 - ung DVU0393 0.42 -0.6 442,159 + ung DVU0393 0.54 -0.2 442,164 + ung DVU0393 0.54 -0.2 442,202 - ung DVU0393 0.59 -0.3 442,229 - ung DVU0393 0.63 -0.2 442,238 + ung DVU0393 0.64 -0.3 442,245 + ung DVU0393 0.65 -0.3 442,285 + ung DVU0393 0.71 -0.3 442,313 - ung DVU0393 0.74 +1.2 442,364 - ung DVU0393 0.81 -0.6 442,378 - ung DVU0393 0.83 -0.4 442,394 + ung DVU0393 0.85 -0.5 442,401 + ung DVU0393 0.86 -0.4 442,453 + -0.3 442,547 + -0.5 442,629 + -0.2 442,629 + +2.1 442,631 + -0.7 442,631 + +0.0 442,637 - -0.4 442,723 - -0.7 442,725 + +1.1 443,812 - -0.4 444,050 + hit DVU0395 0.14 -1.8 444,050 + hit DVU0395 0.14 +1.2 444,053 - hit DVU0395 0.15 -0.2 444,058 - hit DVU0395 0.16 -0.7 444,176 + hit DVU0395 0.44 -1.6 444,234 + hit DVU0395 0.58 -0.9 444,242 - hit DVU0395 0.60 +0.2 444,242 - hit DVU0395 0.60 -0.0 444,394 - -0.6
Or see this region's nucleotide sequence