Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2911 and rpmE are separated by 201 nucleotides rpmE and DVU2913 are separated by 114 nucleotides
DVU2911: DVU2911 - hemolysin A (TIGR), at 3,012,054 to 3,012,815
DVU2911
DVU2912: rpmE - ribosomal protein L31 (TIGR), at 3,013,017 to 3,013,232
rpmE
DVU2913: DVU2913 - lipoprotein, putative (TIGR), at 3,013,347 to 3,014,354
DVU2913
Position (kb)
3013
3014 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3012.182 kb on - strand, within DVU2911 at 3012.197 kb on - strand, within DVU2911 at 3012.214 kb on + strand, within DVU2911 at 3012.217 kb on - strand, within DVU2911 at 3012.217 kb on - strand, within DVU2911 at 3012.241 kb on - strand, within DVU2911 at 3012.359 kb on + strand, within DVU2911 at 3012.372 kb on - strand, within DVU2911 at 3012.457 kb on - strand, within DVU2911 at 3012.474 kb on + strand, within DVU2911 at 3012.477 kb on - strand, within DVU2911 at 3012.482 kb on - strand, within DVU2911 at 3012.482 kb on - strand, within DVU2911 at 3012.525 kb on - strand, within DVU2911 at 3012.534 kb on + strand, within DVU2911 at 3012.703 kb on + strand, within DVU2911 at 3012.723 kb on - strand, within DVU2911 at 3012.742 kb on + strand at 3012.743 kb on - strand at 3012.747 kb on + strand at 3012.778 kb on - strand at 3012.789 kb on - strand at 3012.799 kb on - strand at 3013.661 kb on + strand, within DVU2913 at 3013.661 kb on + strand, within DVU2913 at 3013.666 kb on + strand, within DVU2913 at 3013.753 kb on + strand, within DVU2913 at 3013.761 kb on - strand, within DVU2913 at 3013.881 kb on + strand, within DVU2913 at 3013.929 kb on - strand, within DVU2913 at 3013.964 kb on + strand, within DVU2913 at 3014.027 kb on - strand, within DVU2913 at 3014.028 kb on + strand, within DVU2913 at 3014.040 kb on + strand, within DVU2913 at 3014.048 kb on - strand, within DVU2913 at 3014.048 kb on - strand, within DVU2913 at 3014.048 kb on - strand, within DVU2913 at 3014.106 kb on - strand, within DVU2913 at 3014.111 kb on + strand, within DVU2913 at 3014.111 kb on + strand, within DVU2913 at 3014.119 kb on - strand, within DVU2913 at 3014.119 kb on - strand, within DVU2913 at 3014.195 kb on - strand, within DVU2913 at 3014.200 kb on - strand, within DVU2913 at 3014.200 kb on - strand, within DVU2913
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 3,012,182 - DVU2911 0.17 -0.4 3,012,197 - DVU2911 0.19 -0.0 3,012,214 + DVU2911 0.21 -1.2 3,012,217 - DVU2911 0.21 -0.4 3,012,217 - DVU2911 0.21 -0.4 3,012,241 - DVU2911 0.25 -0.4 3,012,359 + DVU2911 0.40 -0.4 3,012,372 - DVU2911 0.42 -0.8 3,012,457 - DVU2911 0.53 -0.2 3,012,474 + DVU2911 0.55 +0.2 3,012,477 - DVU2911 0.56 -1.2 3,012,482 - DVU2911 0.56 +0.1 3,012,482 - DVU2911 0.56 +0.1 3,012,525 - DVU2911 0.62 -0.4 3,012,534 + DVU2911 0.63 -0.3 3,012,703 + DVU2911 0.85 -1.3 3,012,723 - DVU2911 0.88 +0.1 3,012,742 + +0.6 3,012,743 - -0.9 3,012,747 + -0.4 3,012,778 - -1.1 3,012,789 - -1.8 3,012,799 - +1.1 3,013,661 + DVU2913 0.31 -0.6 3,013,661 + DVU2913 0.31 -1.2 3,013,666 + DVU2913 0.32 -1.5 3,013,753 + DVU2913 0.40 -0.9 3,013,761 - DVU2913 0.41 -0.8 3,013,881 + DVU2913 0.53 -0.4 3,013,929 - DVU2913 0.58 -0.8 3,013,964 + DVU2913 0.61 -0.7 3,014,027 - DVU2913 0.67 -0.6 3,014,028 + DVU2913 0.68 -0.0 3,014,040 + DVU2913 0.69 -1.1 3,014,048 - DVU2913 0.70 -0.5 3,014,048 - DVU2913 0.70 -1.8 3,014,048 - DVU2913 0.70 -0.6 3,014,106 - DVU2913 0.75 -3.4 3,014,111 + DVU2913 0.76 -1.7 3,014,111 + DVU2913 0.76 -1.8 3,014,119 - DVU2913 0.77 -0.8 3,014,119 - DVU2913 0.77 -0.4 3,014,195 - DVU2913 0.84 -0.9 3,014,200 - DVU2913 0.85 -0.9 3,014,200 - DVU2913 0.85 -0.5
Or see this region's nucleotide sequence