Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2650

Experiment: MoLS4 with L-Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2648 and DVU2649 overlap by 4 nucleotidesDVU2649 and DVU2650 are separated by 544 nucleotidesDVU2650 and DVU2651 are separated by 152 nucleotidesDVU2651 and DVU2652 are separated by 192 nucleotides DVU2648: DVU2648 - hypothetical protein (TIGR), at 2,764,569 to 2,764,895 DVU2648 DVU2649: DVU2649 - hypothetical protein (TIGR), at 2,764,892 to 2,765,152 DVU2649 DVU2650: DVU2650 - hypothetical protein (TIGR), at 2,765,697 to 2,766,302 DVU2650 DVU2651: DVU2651 - hypothetical protein (TIGR), at 2,766,455 to 2,766,631 DVU2651 DVU2652: DVU2652 - hypothetical protein (TIGR), at 2,766,824 to 2,767,405 DVU2652 Position (kb) 2765 2766 2767Strain fitness (log2 ratio) -2 -1 0 1at 2764.742 kb on - strand, within DVU2648at 2764.767 kb on - strand, within DVU2648at 2764.848 kb on + strand, within DVU2648at 2764.856 kb on - strand, within DVU2648at 2764.875 kb on - strandat 2764.899 kb on - strandat 2764.922 kb on - strand, within DVU2649at 2764.944 kb on - strand, within DVU2649at 2764.944 kb on - strand, within DVU2649at 2764.955 kb on + strand, within DVU2649at 2765.045 kb on + strand, within DVU2649at 2765.053 kb on - strand, within DVU2649at 2765.350 kb on + strandat 2765.360 kb on + strandat 2765.390 kb on - strandat 2765.524 kb on + strandat 2765.532 kb on - strandat 2765.582 kb on - strandat 2765.654 kb on - strandat 2765.654 kb on - strandat 2765.771 kb on + strand, within DVU2650at 2765.926 kb on + strand, within DVU2650at 2765.964 kb on - strand, within DVU2650at 2765.977 kb on + strand, within DVU2650at 2766.015 kb on + strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.437 kb on - strandat 2766.684 kb on + strandat 2766.703 kb on + strandat 2766.918 kb on - strand, within DVU2652at 2767.225 kb on - strand, within DVU2652at 2767.268 kb on + strand, within DVU2652

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N)
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2,764,742 - DVU2648 0.53 +0.0
2,764,767 - DVU2648 0.61 -0.1
2,764,848 + DVU2648 0.85 +0.6
2,764,856 - DVU2648 0.88 +0.2
2,764,875 - -0.8
2,764,899 - +0.4
2,764,922 - DVU2649 0.11 -0.1
2,764,944 - DVU2649 0.20 -0.9
2,764,944 - DVU2649 0.20 -0.6
2,764,955 + DVU2649 0.24 +0.5
2,765,045 + DVU2649 0.59 +0.2
2,765,053 - DVU2649 0.62 +1.4
2,765,350 + -0.8
2,765,360 + -1.4
2,765,390 - -0.0
2,765,524 + -0.3
2,765,532 - -0.6
2,765,582 - +0.1
2,765,654 - -0.2
2,765,654 - -1.2
2,765,771 + DVU2650 0.12 +0.8
2,765,926 + DVU2650 0.38 -0.8
2,765,964 - DVU2650 0.44 -1.0
2,765,977 + DVU2650 0.46 -1.1
2,766,015 + DVU2650 0.52 -2.0
2,766,068 - DVU2650 0.61 +0.4
2,766,068 - DVU2650 0.61 -0.9
2,766,437 - +0.3
2,766,684 + +0.8
2,766,703 + -0.6
2,766,918 - DVU2652 0.16 -0.3
2,767,225 - DVU2652 0.69 -0.4
2,767,268 + DVU2652 0.76 -0.3

Or see this region's nucleotide sequence