Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2399 and DVU2400 overlap by 8 nucleotides DVU2400 and DVU2401 overlap by 4 nucleotides
DVU2399: DVU2399 - hydrogenase, putative (TIGR), at 2,502,951 to 2,503,838
DVU2399
DVU2400: DVU2400 - hydrogenase, putative (TIGR), at 2,503,831 to 2,504,913
DVU2400
DVU2401: DVU2401 - hydrogenase, iron-sulfur cluster-binding subunit, putative (TIGR), at 2,504,910 to 2,506,394
DVU2401
Position (kb)
2503
2504
2505 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2502.866 kb on - strand at 2502.932 kb on + strand at 2502.937 kb on + strand at 2502.937 kb on + strand at 2502.945 kb on - strand at 2502.945 kb on - strand at 2502.980 kb on + strand at 2502.995 kb on - strand at 2502.995 kb on - strand at 2502.995 kb on - strand at 2503.081 kb on + strand, within DVU2399 at 2503.177 kb on + strand, within DVU2399 at 2503.185 kb on - strand, within DVU2399 at 2503.330 kb on - strand, within DVU2399 at 2503.330 kb on - strand, within DVU2399 at 2503.347 kb on - strand, within DVU2399 at 2503.347 kb on - strand, within DVU2399 at 2503.349 kb on + strand, within DVU2399 at 2503.349 kb on + strand, within DVU2399 at 2503.374 kb on + strand, within DVU2399 at 2503.725 kb on + strand, within DVU2399 at 2503.735 kb on + strand, within DVU2399 at 2503.735 kb on + strand, within DVU2399 at 2503.735 kb on + strand, within DVU2399 at 2503.743 kb on - strand, within DVU2399 at 2503.771 kb on - strand at 2503.781 kb on + strand at 2504.030 kb on - strand, within DVU2400 at 2504.058 kb on + strand, within DVU2400 at 2504.267 kb on - strand, within DVU2400 at 2504.452 kb on + strand, within DVU2400 at 2504.491 kb on - strand, within DVU2400 at 2504.545 kb on - strand, within DVU2400 at 2504.668 kb on + strand, within DVU2400 at 2504.676 kb on - strand, within DVU2400 at 2504.759 kb on - strand, within DVU2400 at 2504.876 kb on + strand at 2504.899 kb on - strand at 2505.052 kb on - strand at 2505.086 kb on + strand, within DVU2401 at 2505.220 kb on - strand, within DVU2401 at 2505.258 kb on + strand, within DVU2401 at 2505.367 kb on + strand, within DVU2401 at 2505.369 kb on + strand, within DVU2401 at 2505.375 kb on - strand, within DVU2401 at 2505.462 kb on - strand, within DVU2401 at 2505.549 kb on + strand, within DVU2401 at 2505.575 kb on + strand, within DVU2401 at 2505.737 kb on + strand, within DVU2401 at 2505.850 kb on + strand, within DVU2401
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 2,502,866 - -1.1 2,502,932 + -1.8 2,502,937 + +0.7 2,502,937 + -0.9 2,502,945 - -1.4 2,502,945 - -1.1 2,502,980 + -2.0 2,502,995 - -1.2 2,502,995 - -1.3 2,502,995 - +0.1 2,503,081 + DVU2399 0.15 -2.0 2,503,177 + DVU2399 0.25 -1.9 2,503,185 - DVU2399 0.26 -0.8 2,503,330 - DVU2399 0.43 -1.4 2,503,330 - DVU2399 0.43 +0.1 2,503,347 - DVU2399 0.45 +0.5 2,503,347 - DVU2399 0.45 -1.7 2,503,349 + DVU2399 0.45 -2.2 2,503,349 + DVU2399 0.45 -2.7 2,503,374 + DVU2399 0.48 -1.3 2,503,725 + DVU2399 0.87 -0.2 2,503,735 + DVU2399 0.88 -1.9 2,503,735 + DVU2399 0.88 -0.9 2,503,735 + DVU2399 0.88 -1.6 2,503,743 - DVU2399 0.89 -1.7 2,503,771 - -2.1 2,503,781 + +1.5 2,504,030 - DVU2400 0.18 -2.1 2,504,058 + DVU2400 0.21 -1.4 2,504,267 - DVU2400 0.40 -1.2 2,504,452 + DVU2400 0.57 -0.2 2,504,491 - DVU2400 0.61 -3.8 2,504,545 - DVU2400 0.66 -2.2 2,504,668 + DVU2400 0.77 -2.1 2,504,676 - DVU2400 0.78 +0.1 2,504,759 - DVU2400 0.86 -2.6 2,504,876 + -1.3 2,504,899 - -1.3 2,505,052 - -1.5 2,505,086 + DVU2401 0.12 -2.9 2,505,220 - DVU2401 0.21 -1.2 2,505,258 + DVU2401 0.23 -0.5 2,505,367 + DVU2401 0.31 -3.1 2,505,369 + DVU2401 0.31 -2.5 2,505,375 - DVU2401 0.31 -2.2 2,505,462 - DVU2401 0.37 -1.9 2,505,549 + DVU2401 0.43 -2.1 2,505,575 + DVU2401 0.45 -0.1 2,505,737 + DVU2401 0.56 +0.5 2,505,850 + DVU2401 0.63 -1.9
Or see this region's nucleotide sequence