Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1407 and DVU1408 are separated by 157 nucleotides DVU1408 and DVU1409 are separated by 17 nucleotides DVU1409 and DVU1410 are separated by 276 nucleotides
DVU1407: DVU1407 - radical SAM domain protein (TIGR), at 1,475,979 to 1,477,454
DVU1407
DVU1408: DVU1408 - hypothetical protein (TIGR), at 1,477,612 to 1,477,914
DVU1408
DVU1409: DVU1409 - hypothetical protein (TIGR), at 1,477,932 to 1,478,396
DVU1409
DVU1410: DVU1410 - conserved domain protein (TIGR), at 1,478,673 to 1,479,545
DVU1410
Position (kb)
1477
1478
1479 Strain fitness (log2 ratio)
-2
-1
0
1 at 1477.005 kb on - strand, within DVU1407 at 1477.156 kb on - strand, within DVU1407 at 1477.405 kb on + strand at 1477.662 kb on - strand, within DVU1408 at 1477.662 kb on - strand, within DVU1408 at 1477.730 kb on + strand, within DVU1408 at 1477.748 kb on + strand, within DVU1408 at 1477.756 kb on - strand, within DVU1408 at 1477.765 kb on + strand, within DVU1408 at 1477.790 kb on + strand, within DVU1408 at 1477.808 kb on + strand, within DVU1408 at 1477.808 kb on + strand, within DVU1408 at 1477.816 kb on - strand, within DVU1408 at 1477.940 kb on - strand at 1478.094 kb on + strand, within DVU1409 at 1478.137 kb on - strand, within DVU1409 at 1478.440 kb on + strand at 1478.496 kb on + strand at 1478.496 kb on + strand at 1478.496 kb on + strand at 1478.504 kb on - strand at 1478.504 kb on - strand at 1478.504 kb on - strand at 1478.568 kb on + strand at 1478.568 kb on + strand at 1478.576 kb on - strand at 1478.741 kb on - strand at 1478.777 kb on + strand, within DVU1410 at 1478.867 kb on + strand, within DVU1410 at 1478.884 kb on + strand, within DVU1410 at 1478.966 kb on - strand, within DVU1410 at 1478.994 kb on + strand, within DVU1410 at 1479.000 kb on + strand, within DVU1410 at 1479.010 kb on + strand, within DVU1410 at 1479.030 kb on + strand, within DVU1410 at 1479.038 kb on - strand, within DVU1410 at 1479.038 kb on - strand, within DVU1410 at 1479.043 kb on - strand, within DVU1410 at 1479.069 kb on + strand, within DVU1410 at 1479.069 kb on + strand, within DVU1410 at 1479.072 kb on - strand, within DVU1410
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 1,477,005 - DVU1407 0.70 -0.7 1,477,156 - DVU1407 0.80 +1.6 1,477,405 + +0.4 1,477,662 - DVU1408 0.17 +0.6 1,477,662 - DVU1408 0.17 +1.0 1,477,730 + DVU1408 0.39 -0.2 1,477,748 + DVU1408 0.45 -0.1 1,477,756 - DVU1408 0.48 +1.5 1,477,765 + DVU1408 0.50 +0.3 1,477,790 + DVU1408 0.59 -0.0 1,477,808 + DVU1408 0.65 +0.0 1,477,808 + DVU1408 0.65 +0.3 1,477,816 - DVU1408 0.67 +0.5 1,477,940 - +1.6 1,478,094 + DVU1409 0.35 +1.4 1,478,137 - DVU1409 0.44 +1.4 1,478,440 + +0.8 1,478,496 + -0.4 1,478,496 + +0.2 1,478,496 + +0.5 1,478,504 - -0.8 1,478,504 - -0.4 1,478,504 - +0.1 1,478,568 + -0.1 1,478,568 + -0.1 1,478,576 - -0.5 1,478,741 - -0.6 1,478,777 + DVU1410 0.12 +0.4 1,478,867 + DVU1410 0.22 +0.6 1,478,884 + DVU1410 0.24 -0.9 1,478,966 - DVU1410 0.34 -0.6 1,478,994 + DVU1410 0.37 -1.8 1,479,000 + DVU1410 0.37 -1.2 1,479,010 + DVU1410 0.39 -0.2 1,479,030 + DVU1410 0.41 -0.7 1,479,038 - DVU1410 0.42 +1.2 1,479,038 - DVU1410 0.42 -0.6 1,479,043 - DVU1410 0.42 -0.7 1,479,069 + DVU1410 0.45 +0.1 1,479,069 + DVU1410 0.45 -0.2 1,479,072 - DVU1410 0.46 +0.2
Or see this region's nucleotide sequence