Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23160

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,400,181	-				-0.0
2,400,181	-				+0.0
2,400,181	-				-0.6
2,400,181	-				+0.1
2,400,181	-				-0.9
2,400,181	-				-0.9
2,400,181	-				-1.1
2,400,210	-				-0.1
2,400,215	-				+0.4
2,400,234	-				-0.7
2,400,315	-		PGA1_c23150	0.13	-0.2
2,400,317	+		PGA1_c23150	0.13	-0.1
2,400,336	-		PGA1_c23150	0.15	-1.1
2,400,391	-		PGA1_c23150	0.20	+0.5
2,400,469	-		PGA1_c23150	0.28	-0.1
2,400,471	-		PGA1_c23150	0.28	+0.6
2,400,471	-		PGA1_c23150	0.28	-0.1
2,400,523	+		PGA1_c23150	0.33	+1.4
2,400,523	+		PGA1_c23150	0.33	-0.2
2,400,621	-		PGA1_c23150	0.43	-0.3
2,400,681	+		PGA1_c23150	0.49	+0.2
2,400,684	+		PGA1_c23150	0.50	+1.8
2,400,731	-		PGA1_c23150	0.54	-0.3
2,400,771	+		PGA1_c23150	0.58	+0.3
2,400,826	-		PGA1_c23150	0.64	-1.3
2,400,855	-		PGA1_c23150	0.67	+0.2
2,400,899	+		PGA1_c23150	0.71	-0.6
2,400,907	-		PGA1_c23150	0.72	+0.4
2,400,976	+		PGA1_c23150	0.79	-1.0
2,400,976	+		PGA1_c23150	0.79	+0.2
2,400,997	+		PGA1_c23150	0.81	+0.6
2,401,046	+		PGA1_c23150	0.86	-0.8
2,401,046	+		PGA1_c23150	0.86	+0.6
2,401,059	-		PGA1_c23150	0.87	+1.4
2,401,084	-		PGA1_c23150	0.90	-0.3
2,401,219	-				-0.1
2,401,239	+				+0.3
2,401,272	+				+1.0
2,401,365	+		PGA1_c23160	0.15	+0.4
2,401,365	+		PGA1_c23160	0.15	-0.4
2,401,483	+		PGA1_c23160	0.24	-0.8
2,401,517	+		PGA1_c23160	0.26	-0.5
2,401,553	+		PGA1_c23160	0.29	-0.2
2,401,561	-		PGA1_c23160	0.30	-0.9
2,401,561	-		PGA1_c23160	0.30	-1.1
2,401,566	-		PGA1_c23160	0.30	-0.0
2,401,622	-		PGA1_c23160	0.34	-0.5
2,401,682	+		PGA1_c23160	0.39	-0.5
2,401,743	-		PGA1_c23160	0.44	-0.9
2,401,746	-		PGA1_c23160	0.44	-0.2
2,401,751	-		PGA1_c23160	0.44	-1.3
2,401,848	+		PGA1_c23160	0.52	+0.6
2,401,874	-		PGA1_c23160	0.54	-0.1
2,401,890	-		PGA1_c23160	0.55	-0.5
2,401,914	+		PGA1_c23160	0.57	-0.7
2,401,949	+		PGA1_c23160	0.60	+0.1
2,401,981	+		PGA1_c23160	0.62	+0.5
2,401,981	+		PGA1_c23160	0.62	-0.9
2,401,981	+		PGA1_c23160	0.62	-0.1
2,401,981	+		PGA1_c23160	0.62	+0.5
2,401,981	+		PGA1_c23160	0.62	-0.3
2,401,989	-		PGA1_c23160	0.63	-0.1
2,401,989	-		PGA1_c23160	0.63	+0.2
2,401,989	-		PGA1_c23160	0.63	+0.3
2,401,989	-		PGA1_c23160	0.63	+0.1
2,401,989	-		PGA1_c23160	0.63	+0.1
2,402,055	-		PGA1_c23160	0.68	-0.2
2,402,087	+		PGA1_c23160	0.70	-0.2
2,402,087	+		PGA1_c23160	0.70	-0.4
2,402,211	+		PGA1_c23160	0.80	-0.7
2,402,219	-		PGA1_c23160	0.81	-0.1
2,402,270	-		PGA1_c23160	0.84	+0.0
2,402,457	+				-0.2
2,402,478	-				+0.3
2,402,490	-				-0.1
2,402,500	+				-0.3
2,402,505	+				-0.0
2,402,513	+				+0.1
2,402,513	-				+0.6
2,402,537	+				+0.9
2,402,561	+				+0.5
2,402,646	-		PGA1_c23170	0.11	+0.9
2,402,733	+		PGA1_c23170	0.17	-0.3
2,402,765	-		PGA1_c23170	0.20	-0.3
2,402,775	+		PGA1_c23170	0.20	+0.2
2,402,876	+		PGA1_c23170	0.27	+0.4
2,402,884	-		PGA1_c23170	0.28	+1.0
2,402,886	+		PGA1_c23170	0.28	+0.8
2,402,886	+		PGA1_c23170	0.28	+0.4
2,402,900	+		PGA1_c23170	0.29	+0.3
2,402,900	+		PGA1_c23170	0.29	-0.4
2,402,930	+		PGA1_c23170	0.31	+0.2
2,402,943	-		PGA1_c23170	0.32	-0.0
2,403,013	+		PGA1_c23170	0.37	+0.0
2,403,021	-		PGA1_c23170	0.38	+1.0
2,403,149	+		PGA1_c23170	0.47	+0.7
2,403,149	+		PGA1_c23170	0.47	-0.3
2,403,159	+		PGA1_c23170	0.47	-1.5
2,403,258	-		PGA1_c23170	0.54	-0.7
2,403,295	-		PGA1_c23170	0.57	-0.8
2,403,311	+		PGA1_c23170	0.58	+1.2
2,403,319	-		PGA1_c23170	0.59	+0.2
2,403,329	-		PGA1_c23170	0.59	-1.0
2,403,329	-		PGA1_c23170	0.59	+0.2
2,403,384	+		PGA1_c23170	0.63	+1.3
2,403,390	-		PGA1_c23170	0.64	+0.0
2,403,390	-		PGA1_c23170	0.64	-1.1
2,403,404	+		PGA1_c23170	0.64	-0.2
2,403,412	-		PGA1_c23170	0.65	+1.2
2,403,422	+		PGA1_c23170	0.66	-0.7
2,403,456	-		PGA1_c23170	0.68	-0.3
2,403,456	-		PGA1_c23170	0.68	+0.0