Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11890

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
1,231,745	+				+0.1
1,231,745	+				+0.5
1,231,753	-				-1.1
1,231,843	-				+0.4
1,231,849	-				-0.0
1,231,851	+				+0.6
1,231,856	+				-0.4
1,231,932	+				+0.8
1,232,173	-				-0.4
1,232,252	+		PGA1_c11890	0.11	-0.6
1,232,297	+		PGA1_c11890	0.14	-0.4
1,232,301	-		PGA1_c11890	0.15	-0.7
1,232,305	-		PGA1_c11890	0.15	+0.4
1,232,320	-		PGA1_c11890	0.16	+0.0
1,232,320	-		PGA1_c11890	0.16	+0.7
1,232,320	-		PGA1_c11890	0.16	-0.1
1,232,320	-		PGA1_c11890	0.16	-1.3
1,232,320	-		PGA1_c11890	0.16	+0.1
1,232,320	-		PGA1_c11890	0.16	+0.4
1,232,320	-		PGA1_c11890	0.16	-1.4
1,232,320	-		PGA1_c11890	0.16	+0.2
1,232,320	-		PGA1_c11890	0.16	+0.5
1,232,320	-		PGA1_c11890	0.16	+0.7
1,232,320	-		PGA1_c11890	0.16	-0.4
1,232,320	-		PGA1_c11890	0.16	-0.0
1,232,320	-		PGA1_c11890	0.16	-1.2
1,232,320	-		PGA1_c11890	0.16	-0.3
1,232,320	-		PGA1_c11890	0.16	-0.2
1,232,370	+		PGA1_c11890	0.19	+0.1
1,232,380	+		PGA1_c11890	0.20	-0.1
1,232,424	-		PGA1_c11890	0.23	+0.5
1,232,440	+		PGA1_c11890	0.24	-1.2
1,232,451	+		PGA1_c11890	0.25	+1.0
1,232,484	+		PGA1_c11890	0.27	-0.1
1,232,561	-		PGA1_c11890	0.33	-2.0
1,232,563	+		PGA1_c11890	0.33	+0.5
1,232,583	-		PGA1_c11890	0.34	-1.3
1,232,615	-		PGA1_c11890	0.36	-0.7
1,232,657	+		PGA1_c11890	0.39	-0.4
1,232,665	-		PGA1_c11890	0.40	-0.1
1,232,707	+		PGA1_c11890	0.43	+1.0
1,232,707	+		PGA1_c11890	0.43	-0.0
1,232,707	+		PGA1_c11890	0.43	-0.0
1,232,715	-		PGA1_c11890	0.43	-0.1
1,232,715	-		PGA1_c11890	0.43	-1.0
1,232,715	-		PGA1_c11890	0.43	-0.6
1,232,744	+		PGA1_c11890	0.45	+0.0
1,232,798	+		PGA1_c11890	0.49	-0.4
1,232,806	-		PGA1_c11890	0.50	-0.5
1,232,858	-		PGA1_c11890	0.53	-0.3
1,232,858	-		PGA1_c11890	0.53	+0.5
1,232,864	+		PGA1_c11890	0.54	-0.6
1,232,864	+		PGA1_c11890	0.54	-0.5
1,232,872	-		PGA1_c11890	0.54	-0.0
1,232,874	+		PGA1_c11890	0.54	+0.3
1,232,874	+		PGA1_c11890	0.54	+0.5
1,232,882	-		PGA1_c11890	0.55	+0.0
1,232,882	-		PGA1_c11890	0.55	+0.0
1,232,882	-		PGA1_c11890	0.55	+1.2
1,232,925	-		PGA1_c11890	0.58	-2.1
1,232,941	+		PGA1_c11890	0.59	-0.8
1,233,013	+		PGA1_c11890	0.64	-0.3
1,233,035	+		PGA1_c11890	0.65	-0.7
1,233,055	+		PGA1_c11890	0.67	+0.3
1,233,063	-		PGA1_c11890	0.67	+0.7
1,233,102	-		PGA1_c11890	0.70	-1.0
1,233,247	+		PGA1_c11890	0.80	-0.0
1,233,321	-		PGA1_c11890	0.85	-0.4
1,233,365	+		PGA1_c11890	0.88	-0.2
1,233,373	-		PGA1_c11890	0.89	+0.7
1,233,434	+				+0.2
1,233,442	-				-0.3
1,233,467	-				-0.2
1,233,477	+				-0.1
1,233,485	-				+1.6
1,233,526	+				-0.3
1,233,526	+				-0.3
1,233,534	-				-0.3
1,233,559	+				+0.2
1,233,618	-				-1.0
1,233,689	+				-0.2
1,233,845	-				+0.2
1,233,847	+				+0.6
1,233,893	-		PGA1_c11900	0.11	+0.1
1,233,921	-		PGA1_c11900	0.13	-0.6
1,233,967	+		PGA1_c11900	0.15	-0.2
1,233,967	+		PGA1_c11900	0.15	+0.3
1,233,967	+		PGA1_c11900	0.15	-0.9
1,233,967	-		PGA1_c11900	0.15	-0.1
1,234,009	+		PGA1_c11900	0.18	-0.9
1,234,018	-		PGA1_c11900	0.18	+0.3
1,234,054	+		PGA1_c11900	0.20	-0.4
1,234,078	+		PGA1_c11900	0.21	+0.1
1,234,081	+		PGA1_c11900	0.21	+0.6
1,234,152	-		PGA1_c11900	0.25	+0.5
1,234,187	+		PGA1_c11900	0.27	+0.1
1,234,430	-		PGA1_c11900	0.40	-0.4
1,234,454	+		PGA1_c11900	0.41	+0.1
1,234,462	-		PGA1_c11900	0.42	+0.9
1,234,497	-		PGA1_c11900	0.43	-0.3