Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2671 and DVU2672 are separated by 97 nucleotides DVU2672 and glpA are separated by 555 nucleotides
DVU2671: DVU2671 - HDIG/HD/KH domain protein (TIGR), at 2,781,727 to 2,783,286
DVU2671
DVU2672: DVU2672 - glycine transporter (from data) , at 2,783,384 to 2,784,007
DVU2672
DVU2673: glpA - anaerobic glycerol-3-phosphate dehydrogenase, subunit A, truncation (TIGR), at 2,784,563 to 2,785,732
glpA
Position (kb)
2783
2784
2785 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2783.508 kb on - strand, within DVU2672 at 2783.598 kb on + strand, within DVU2672 at 2783.631 kb on + strand, within DVU2672 at 2783.644 kb on + strand, within DVU2672 at 2783.652 kb on - strand, within DVU2672 at 2783.652 kb on - strand, within DVU2672 at 2783.684 kb on - strand, within DVU2672 at 2783.684 kb on - strand, within DVU2672 at 2783.693 kb on + strand, within DVU2672 at 2783.732 kb on - strand, within DVU2672 at 2783.766 kb on - strand, within DVU2672 at 2783.784 kb on + strand, within DVU2672 at 2783.828 kb on + strand, within DVU2672 at 2783.887 kb on + strand, within DVU2672 at 2783.890 kb on - strand, within DVU2672 at 2783.898 kb on + strand, within DVU2672 at 2783.960 kb on - strand at 2784.014 kb on - strand at 2784.215 kb on - strand at 2784.224 kb on - strand at 2784.255 kb on - strand at 2784.257 kb on - strand at 2784.395 kb on - strand at 2784.431 kb on - strand at 2784.554 kb on + strand at 2784.649 kb on + strand at 2784.657 kb on - strand at 2784.717 kb on + strand, within glpA at 2784.833 kb on - strand, within glpA at 2784.924 kb on + strand, within glpA at 2784.932 kb on - strand, within glpA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 2,783,508 - DVU2672 0.20 -3.9 2,783,598 + DVU2672 0.34 -3.8 2,783,631 + DVU2672 0.40 -2.7 2,783,644 + DVU2672 0.42 -0.2 2,783,652 - DVU2672 0.43 -4.0 2,783,652 - DVU2672 0.43 -4.6 2,783,684 - DVU2672 0.48 -3.8 2,783,684 - DVU2672 0.48 -4.3 2,783,693 + DVU2672 0.50 -4.3 2,783,732 - DVU2672 0.56 -4.6 2,783,766 - DVU2672 0.61 -2.9 2,783,784 + DVU2672 0.64 -4.4 2,783,828 + DVU2672 0.71 -4.2 2,783,887 + DVU2672 0.81 -3.3 2,783,890 - DVU2672 0.81 -3.8 2,783,898 + DVU2672 0.82 -5.3 2,783,960 - -3.9 2,784,014 - -0.1 2,784,215 - -2.1 2,784,224 - +0.8 2,784,255 - -0.5 2,784,257 - +0.6 2,784,395 - +0.0 2,784,431 - -0.2 2,784,554 + -0.9 2,784,649 + +0.4 2,784,657 - -0.9 2,784,717 + glpA DVU2673 0.13 +0.4 2,784,833 - glpA DVU2673 0.23 -0.0 2,784,924 + glpA DVU2673 0.31 +1.3 2,784,932 - glpA DVU2673 0.32 -0.4
Or see this region's nucleotide sequence