Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2395 and adh are separated by 1 nucleotides adh and DVU2397 are separated by 488 nucleotides
DVU2395: DVU2395 - sensor histidine kinase (TIGR), at 2,498,363 to 2,499,619
DVU2395
DVU2396: adh - alcohol dehydrogenase (Chris Hemme), at 2,499,621 to 2,500,763
adh
DVU2397: DVU2397 - hypothetical protein (TIGR), at 2,501,252 to 2,501,995
DVU2397
Position (kb)
2499
2500
2501 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2498.790 kb on - strand, within DVU2395 at 2498.828 kb on + strand, within DVU2395 at 2498.951 kb on + strand, within DVU2395 at 2499.000 kb on - strand, within DVU2395 at 2499.000 kb on - strand, within DVU2395 at 2499.080 kb on - strand, within DVU2395 at 2499.099 kb on - strand, within DVU2395 at 2499.102 kb on + strand, within DVU2395 at 2499.141 kb on - strand, within DVU2395 at 2499.290 kb on - strand, within DVU2395 at 2499.335 kb on - strand, within DVU2395 at 2499.341 kb on - strand, within DVU2395 at 2499.401 kb on + strand, within DVU2395 at 2499.522 kb on + strand at 2499.542 kb on - strand at 2499.547 kb on - strand at 2499.569 kb on - strand at 2499.631 kb on + strand at 2499.639 kb on - strand at 2499.724 kb on + strand at 2499.810 kb on - strand, within adh at 2499.937 kb on - strand, within adh at 2499.995 kb on + strand, within adh at 2500.100 kb on - strand, within adh at 2500.103 kb on + strand, within adh at 2500.103 kb on + strand, within adh at 2500.111 kb on - strand, within adh at 2500.182 kb on + strand, within adh at 2500.307 kb on - strand, within adh at 2500.346 kb on + strand, within adh at 2500.459 kb on - strand, within adh at 2500.479 kb on + strand, within adh at 2500.508 kb on + strand, within adh at 2500.583 kb on + strand, within adh at 2500.597 kb on + strand, within adh at 2500.608 kb on + strand, within adh at 2500.695 kb on + strand at 2500.769 kb on - strand at 2500.791 kb on - strand at 2500.793 kb on - strand at 2500.818 kb on + strand at 2500.826 kb on - strand at 2500.826 kb on - strand at 2500.826 kb on - strand at 2500.828 kb on + strand at 2500.836 kb on - strand at 2500.836 kb on - strand at 2500.836 kb on - strand at 2500.841 kb on - strand at 2500.868 kb on + strand at 2500.868 kb on + strand at 2500.868 kb on + strand at 2500.868 kb on + strand at 2500.868 kb on + strand at 2500.868 kb on + strand at 2500.876 kb on - strand at 2500.876 kb on - strand at 2500.876 kb on - strand at 2500.876 kb on - strand at 2500.986 kb on + strand at 2501.014 kb on - strand at 2501.141 kb on + strand at 2501.141 kb on + strand at 2501.149 kb on - strand at 2501.160 kb on - strand at 2501.248 kb on + strand at 2501.250 kb on + strand at 2501.258 kb on - strand at 2501.275 kb on - strand at 2501.286 kb on + strand at 2501.342 kb on + strand, within DVU2397 at 2501.435 kb on + strand, within DVU2397 at 2501.478 kb on - strand, within DVU2397 at 2501.499 kb on - strand, within DVU2397 at 2501.516 kb on - strand, within DVU2397 at 2501.518 kb on + strand, within DVU2397 at 2501.521 kb on - strand, within DVU2397 at 2501.684 kb on + strand, within DVU2397
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 2,498,790 - DVU2395 0.34 +0.1 2,498,828 + DVU2395 0.37 -0.5 2,498,951 + DVU2395 0.47 +0.0 2,499,000 - DVU2395 0.51 -0.5 2,499,000 - DVU2395 0.51 +2.4 2,499,080 - DVU2395 0.57 +0.4 2,499,099 - DVU2395 0.59 -1.5 2,499,102 + DVU2395 0.59 -1.1 2,499,141 - DVU2395 0.62 +1.4 2,499,290 - DVU2395 0.74 +1.2 2,499,335 - DVU2395 0.77 -1.1 2,499,341 - DVU2395 0.78 -0.6 2,499,401 + DVU2395 0.83 -0.2 2,499,522 + +1.1 2,499,542 - -0.2 2,499,547 - +0.4 2,499,569 - -0.4 2,499,631 + -1.0 2,499,639 - +0.7 2,499,724 + -0.3 2,499,810 - adh DVU2396 0.17 +0.1 2,499,937 - adh DVU2396 0.28 -1.0 2,499,995 + adh DVU2396 0.33 +0.1 2,500,100 - adh DVU2396 0.42 +0.2 2,500,103 + adh DVU2396 0.42 -0.4 2,500,103 + adh DVU2396 0.42 -0.2 2,500,111 - adh DVU2396 0.43 -0.8 2,500,182 + adh DVU2396 0.49 +0.3 2,500,307 - adh DVU2396 0.60 -0.2 2,500,346 + adh DVU2396 0.63 +0.1 2,500,459 - adh DVU2396 0.73 +0.6 2,500,479 + adh DVU2396 0.75 -1.0 2,500,508 + adh DVU2396 0.78 +1.0 2,500,583 + adh DVU2396 0.84 -0.2 2,500,597 + adh DVU2396 0.85 +0.3 2,500,608 + adh DVU2396 0.86 -0.5 2,500,695 + -0.5 2,500,769 - -1.1 2,500,791 - -0.6 2,500,793 - -1.4 2,500,818 + +0.6 2,500,826 - +1.7 2,500,826 - -0.4 2,500,826 - -0.5 2,500,828 + +0.2 2,500,836 - -0.5 2,500,836 - +0.6 2,500,836 - -0.3 2,500,841 - -0.3 2,500,868 + +0.6 2,500,868 + -0.1 2,500,868 + +0.2 2,500,868 + -0.3 2,500,868 + +0.3 2,500,868 + +3.0 2,500,876 - -0.3 2,500,876 - -1.4 2,500,876 - +0.1 2,500,876 - -0.2 2,500,986 + +0.5 2,501,014 - -0.2 2,501,141 + -0.7 2,501,141 + -0.1 2,501,149 - -0.3 2,501,160 - -0.5 2,501,248 + -0.1 2,501,250 + -1.3 2,501,258 - -0.8 2,501,275 - -1.2 2,501,286 + -0.7 2,501,342 + DVU2397 0.12 +0.5 2,501,435 + DVU2397 0.25 -0.3 2,501,478 - DVU2397 0.30 -0.6 2,501,499 - DVU2397 0.33 +0.7 2,501,516 - DVU2397 0.35 -0.0 2,501,518 + DVU2397 0.36 -0.5 2,501,521 - DVU2397 0.36 +0.3 2,501,684 + DVU2397 0.58 -0.3
Or see this region's nucleotide sequence