Experiment: MoLS4 with L-Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1366 and tatA are separated by 62 nucleotides tatA and DVU1368 are separated by 111 nucleotides DVU1368 and DVU1369 are separated by 71 nucleotides DVU1369 and DVU1370 are separated by 12 nucleotides
DVU1366: DVU1366 - lipoprotein, putative (TIGR), at 1,445,139 to 1,446,044
DVU1366
DVU1367: tatA - twin-arginine translocation protein, TatA/E family (TIGR), at 1,446,107 to 1,446,304
tatA
DVU1368: DVU1368 - rhodanese-like domain protein (TIGR), at 1,446,416 to 1,448,038
DVU1368
DVU1369: DVU1369 - hypothetical protein (TIGR), at 1,448,110 to 1,448,484
DVU1369
DVU1370: DVU1370 - hypothetical protein (TIGR), at 1,448,497 to 1,449,369
DVU1370
Position (kb)
1446
1447
1448
1449 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1445.426 kb on + strand, within DVU1366 at 1445.426 kb on + strand, within DVU1366 at 1445.438 kb on + strand, within DVU1366 at 1445.438 kb on + strand, within DVU1366 at 1445.438 kb on + strand, within DVU1366 at 1445.446 kb on - strand, within DVU1366 at 1445.446 kb on - strand, within DVU1366 at 1445.554 kb on + strand, within DVU1366 at 1445.556 kb on + strand, within DVU1366 at 1445.637 kb on - strand, within DVU1366 at 1445.640 kb on + strand, within DVU1366 at 1445.822 kb on + strand, within DVU1366 at 1445.842 kb on - strand, within DVU1366 at 1445.847 kb on - strand, within DVU1366 at 1445.848 kb on + strand, within DVU1366 at 1445.897 kb on - strand, within DVU1366 at 1445.899 kb on + strand, within DVU1366 at 1445.907 kb on - strand, within DVU1366 at 1445.912 kb on - strand, within DVU1366 at 1445.955 kb on + strand at 1445.979 kb on - strand at 1445.991 kb on - strand at 1446.343 kb on - strand at 1446.343 kb on - strand at 1446.343 kb on - strand at 1446.343 kb on - strand at 1446.361 kb on - strand at 1446.381 kb on - strand at 1446.554 kb on + strand at 1446.588 kb on + strand, within DVU1368 at 1446.618 kb on + strand, within DVU1368 at 1446.618 kb on + strand, within DVU1368 at 1446.626 kb on - strand, within DVU1368 at 1446.725 kb on + strand, within DVU1368 at 1446.745 kb on + strand, within DVU1368 at 1446.752 kb on + strand, within DVU1368 at 1446.760 kb on - strand, within DVU1368 at 1446.764 kb on + strand, within DVU1368 at 1446.796 kb on - strand, within DVU1368 at 1446.967 kb on + strand, within DVU1368 at 1447.007 kb on - strand, within DVU1368 at 1447.055 kb on + strand, within DVU1368 at 1447.207 kb on + strand, within DVU1368 at 1447.241 kb on - strand, within DVU1368 at 1447.244 kb on + strand, within DVU1368 at 1447.253 kb on - strand, within DVU1368 at 1447.309 kb on + strand, within DVU1368 at 1447.313 kb on + strand, within DVU1368 at 1447.385 kb on - strand, within DVU1368 at 1447.394 kb on + strand, within DVU1368 at 1447.402 kb on - strand, within DVU1368 at 1447.402 kb on - strand, within DVU1368 at 1447.420 kb on - strand, within DVU1368 at 1447.424 kb on + strand, within DVU1368 at 1447.457 kb on + strand, within DVU1368 at 1447.469 kb on + strand, within DVU1368 at 1447.477 kb on - strand, within DVU1368 at 1447.498 kb on - strand, within DVU1368 at 1447.498 kb on - strand, within DVU1368 at 1447.634 kb on - strand, within DVU1368 at 1447.637 kb on - strand, within DVU1368 at 1447.675 kb on + strand, within DVU1368 at 1447.685 kb on + strand, within DVU1368 at 1447.690 kb on - strand, within DVU1368 at 1447.849 kb on - strand, within DVU1368 at 1447.968 kb on - strand at 1448.075 kb on + strand at 1448.091 kb on + strand at 1448.099 kb on - strand at 1448.112 kb on + strand at 1448.117 kb on + strand at 1448.120 kb on - strand at 1448.120 kb on - strand at 1448.147 kb on - strand at 1448.152 kb on - strand, within DVU1369 at 1448.152 kb on - strand, within DVU1369 at 1448.396 kb on + strand, within DVU1369 at 1448.492 kb on - strand at 1448.492 kb on - strand at 1448.507 kb on + strand at 1448.575 kb on + strand at 1448.651 kb on - strand, within DVU1370 at 1448.651 kb on - strand, within DVU1370 at 1448.656 kb on + strand, within DVU1370 at 1448.819 kb on - strand, within DVU1370 at 1448.825 kb on - strand, within DVU1370 at 1448.973 kb on + strand, within DVU1370 at 1448.989 kb on - strand, within DVU1370
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glycine (N) remove 1,445,426 + DVU1366 0.32 -1.2 1,445,426 + DVU1366 0.32 -1.9 1,445,438 + DVU1366 0.33 -2.0 1,445,438 + DVU1366 0.33 -1.6 1,445,438 + DVU1366 0.33 -2.1 1,445,446 - DVU1366 0.34 -0.2 1,445,446 - DVU1366 0.34 -2.0 1,445,554 + DVU1366 0.46 -1.7 1,445,556 + DVU1366 0.46 -2.3 1,445,637 - DVU1366 0.55 -1.0 1,445,640 + DVU1366 0.55 -0.6 1,445,822 + DVU1366 0.75 -1.2 1,445,842 - DVU1366 0.78 +1.2 1,445,847 - DVU1366 0.78 +1.5 1,445,848 + DVU1366 0.78 -2.0 1,445,897 - DVU1366 0.84 -0.3 1,445,899 + DVU1366 0.84 -1.7 1,445,907 - DVU1366 0.85 -1.3 1,445,912 - DVU1366 0.85 -0.9 1,445,955 + -1.7 1,445,979 - -1.9 1,445,991 - -1.9 1,446,343 - +2.0 1,446,343 - +4.0 1,446,343 - +3.5 1,446,343 - -1.5 1,446,361 - +0.1 1,446,381 - -0.3 1,446,554 + -0.0 1,446,588 + DVU1368 0.11 +0.0 1,446,618 + DVU1368 0.12 +0.3 1,446,618 + DVU1368 0.12 -0.7 1,446,626 - DVU1368 0.13 +0.5 1,446,725 + DVU1368 0.19 +0.2 1,446,745 + DVU1368 0.20 -1.1 1,446,752 + DVU1368 0.21 +1.3 1,446,760 - DVU1368 0.21 -0.4 1,446,764 + DVU1368 0.21 +1.3 1,446,796 - DVU1368 0.23 +1.1 1,446,967 + DVU1368 0.34 -0.4 1,447,007 - DVU1368 0.36 +1.2 1,447,055 + DVU1368 0.39 +1.4 1,447,207 + DVU1368 0.49 -0.4 1,447,241 - DVU1368 0.51 +0.6 1,447,244 + DVU1368 0.51 -0.3 1,447,253 - DVU1368 0.52 +0.1 1,447,309 + DVU1368 0.55 +0.1 1,447,313 + DVU1368 0.55 -0.2 1,447,385 - DVU1368 0.60 +0.1 1,447,394 + DVU1368 0.60 +0.5 1,447,402 - DVU1368 0.61 +0.0 1,447,402 - DVU1368 0.61 -0.2 1,447,420 - DVU1368 0.62 +0.2 1,447,424 + DVU1368 0.62 -0.3 1,447,457 + DVU1368 0.64 -0.3 1,447,469 + DVU1368 0.65 -0.9 1,447,477 - DVU1368 0.65 -1.0 1,447,498 - DVU1368 0.67 +0.0 1,447,498 - DVU1368 0.67 +0.0 1,447,634 - DVU1368 0.75 -0.2 1,447,637 - DVU1368 0.75 +0.0 1,447,675 + DVU1368 0.78 -2.0 1,447,685 + DVU1368 0.78 -0.3 1,447,690 - DVU1368 0.78 +0.3 1,447,849 - DVU1368 0.88 -0.0 1,447,968 - -0.4 1,448,075 + -0.4 1,448,091 + -0.4 1,448,099 - -0.3 1,448,112 + +2.5 1,448,117 + -0.2 1,448,120 - -0.3 1,448,120 - +1.8 1,448,147 - +1.7 1,448,152 - DVU1369 0.11 +0.1 1,448,152 - DVU1369 0.11 -0.6 1,448,396 + DVU1369 0.76 -0.5 1,448,492 - -0.9 1,448,492 - -0.5 1,448,507 + +0.7 1,448,575 + +0.0 1,448,651 - DVU1370 0.18 -0.1 1,448,651 - DVU1370 0.18 +0.7 1,448,656 + DVU1370 0.18 -1.4 1,448,819 - DVU1370 0.37 +0.1 1,448,825 - DVU1370 0.38 +0.1 1,448,973 + DVU1370 0.55 -0.4 1,448,989 - DVU1370 0.56 +0.2
Or see this region's nucleotide sequence