Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2361

Experiment: SMN_rich_noKan

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	SMN_rich_noKan
2,747,238	+		Rru_A2360	0.14	-0.4
2,747,238	+		Rru_A2360	0.14	-0.6
2,747,238	+		Rru_A2360	0.14	-0.3
2,747,238	+		Rru_A2360	0.14	+0.0
2,747,238	+		Rru_A2360	0.14	-0.7
2,747,238	+		Rru_A2360	0.14	-0.4
2,747,238	+		Rru_A2360	0.14	+0.2
2,747,239	-		Rru_A2360	0.14	-0.3
2,747,239	-		Rru_A2360	0.14	-0.6
2,747,239	-		Rru_A2360	0.14	-0.4
2,747,441	+		Rru_A2360	0.34	-0.0
2,747,442	-		Rru_A2360	0.34	-0.5
2,747,442	-		Rru_A2360	0.34	-0.5
2,747,822	+		Rru_A2360	0.71	-0.6
2,747,823	-		Rru_A2360	0.71	-0.5
2,747,823	-		Rru_A2360	0.71	+0.8
2,747,823	-		Rru_A2360	0.71	+0.0
2,747,885	+		Rru_A2360	0.77	-0.8
2,747,885	+		Rru_A2360	0.77	-0.7
2,747,886	-		Rru_A2360	0.77	-0.2
2,747,886	-		Rru_A2360	0.77	-0.2
2,747,886	-		Rru_A2360	0.77	-0.1
2,747,886	-		Rru_A2360	0.77	-0.4
2,747,886	-		Rru_A2360	0.77	-0.1
2,747,886	-		Rru_A2360	0.77	-0.9
2,747,886	-		Rru_A2360	0.77	+0.1
2,747,886	-		Rru_A2360	0.77	+0.1
2,747,887	+		Rru_A2360	0.77	-0.7
2,747,888	-		Rru_A2360	0.77	-0.2
2,748,123	-				-1.1
2,748,163	+				-0.1
2,748,164	-				+0.1
2,748,365	+				+0.1
2,748,365	+				-0.9
2,748,366	-				+1.2
2,748,366	-				-0.4
2,748,366	-				+1.5
2,748,815	-		Rru_A2361	0.14	-1.1
2,749,267	+		Rru_A2361	0.24	+0.0
2,749,267	+		Rru_A2361	0.24	-1.8
2,749,268	-		Rru_A2361	0.24	-1.3
2,749,342	+		Rru_A2361	0.26	-0.5
2,749,342	+		Rru_A2361	0.26	+0.6
2,749,342	+		Rru_A2361	0.26	+0.2
2,749,343	-		Rru_A2361	0.26	-0.4
2,749,469	+		Rru_A2361	0.28	+0.1
2,749,470	-		Rru_A2361	0.28	-0.0
2,749,867	+		Rru_A2361	0.37	+0.1
2,749,867	+		Rru_A2361	0.37	+0.8
2,749,867	+		Rru_A2361	0.37	-0.3
2,749,868	-		Rru_A2361	0.37	-0.8
2,749,868	-		Rru_A2361	0.37	-0.4
2,750,026	+		Rru_A2361	0.40	-0.1
2,750,026	+		Rru_A2361	0.40	-0.2
2,750,027	-		Rru_A2361	0.40	-0.1
2,750,027	-		Rru_A2361	0.40	-0.3
2,750,027	-		Rru_A2361	0.40	+0.0
2,750,027	-		Rru_A2361	0.40	+0.1
2,750,117	+		Rru_A2361	0.42	+0.7
2,750,231	-		Rru_A2361	0.45	-0.3
2,750,311	+		Rru_A2361	0.46	-0.4
2,750,311	+		Rru_A2361	0.46	-0.3
2,750,311	+		Rru_A2361	0.46	-0.3
2,750,311	+		Rru_A2361	0.46	+1.5
2,750,311	+		Rru_A2361	0.46	+0.1
2,750,311	+		Rru_A2361	0.46	-0.1
2,750,312	-		Rru_A2361	0.46	+1.5
2,750,312	-		Rru_A2361	0.46	-0.2
2,750,312	-		Rru_A2361	0.46	+0.8
2,750,312	-		Rru_A2361	0.46	+0.1
2,750,312	-		Rru_A2361	0.46	-0.5
2,750,483	-		Rru_A2361	0.50	-0.4
2,750,656	+		Rru_A2361	0.54	-0.5
2,750,714	-		Rru_A2361	0.55	-0.2
2,750,863	+		Rru_A2361	0.58	-0.5
2,750,863	+		Rru_A2361	0.58	-0.6
2,751,038	-		Rru_A2361	0.62	-0.0
2,751,038	-		Rru_A2361	0.62	-0.1
2,751,075	-		Rru_A2361	0.63	-0.2
2,751,075	-		Rru_A2361	0.63	-0.0
2,751,075	-		Rru_A2361	0.63	-0.0
2,751,075	-		Rru_A2361	0.63	-0.9
2,751,076	+		Rru_A2361	0.63	-0.0
2,751,076	+		Rru_A2361	0.63	-1.2
2,751,076	+		Rru_A2361	0.63	+0.7
2,751,076	+		Rru_A2361	0.63	+0.0
2,751,077	-		Rru_A2361	0.63	-0.8
2,751,077	-		Rru_A2361	0.63	-0.1
2,751,077	-		Rru_A2361	0.63	-0.1
2,751,077	-		Rru_A2361	0.63	-0.4
2,751,263	-		Rru_A2361	0.67	-0.3
2,751,263	-		Rru_A2361	0.67	+0.1
2,751,263	-		Rru_A2361	0.67	-1.0
2,751,305	-		Rru_A2361	0.68	-0.5
2,751,492	-		Rru_A2361	0.72	+0.9
2,751,677	+		Rru_A2361	0.76	-0.3
2,751,677	+		Rru_A2361	0.76	-1.0
2,751,677	+		Rru_A2361	0.76	-0.2
2,751,677	+		Rru_A2361	0.76	-0.1
2,751,679	+		Rru_A2361	0.76	-0.4
2,751,919	+		Rru_A2361	0.81	-0.7
2,751,919	+		Rru_A2361	0.81	+0.6
2,751,920	-		Rru_A2361	0.81	-2.1
2,751,920	-		Rru_A2361	0.81	-0.7
2,751,920	-		Rru_A2361	0.81	-0.0
2,751,920	-		Rru_A2361	0.81	-0.3
2,752,014	-		Rru_A2361	0.83	+0.2
2,752,132	+		Rru_A2361	0.85	-0.2
2,752,132	+		Rru_A2361	0.85	-0.4
2,752,132	+		Rru_A2361	0.85	-1.2
2,752,132	+		Rru_A2361	0.85	-0.1
2,752,133	-		Rru_A2361	0.85	-1.1
2,752,133	-		Rru_A2361	0.85	-0.5
2,752,133	-		Rru_A2361	0.85	+0.5
2,752,133	-		Rru_A2361	0.85	-0.0
2,752,195	+		Rru_A2361	0.87	-1.4
2,752,195	+		Rru_A2361	0.87	+0.2
2,752,196	-		Rru_A2361	0.87	-0.3
2,752,196	-		Rru_A2361	0.87	+0.1
2,752,196	-		Rru_A2361	0.87	-0.4
2,752,373	+				+1.5
2,752,374	-				+0.2
2,752,374	-				-0.2
2,752,374	-				+0.0
2,752,374	-				-0.2
2,752,375	+				-0.0
2,752,627	+				+0.2
2,752,633	+				-0.6
2,752,633	+				+0.1
2,752,634	-				-0.6
2,752,868	-				+0.5
2,752,868	-				-0.3
2,752,933	+				+0.3
2,752,997	+				-0.3
2,752,998	-				-0.3
2,752,998	-				-0.1
2,752,998	-				-0.1
2,752,998	-				+0.3
2,753,045	+		Rru_A2362	0.10	-0.1
2,753,045	+		Rru_A2362	0.10	+0.3
2,753,046	-		Rru_A2362	0.10	-0.6
2,753,046	-		Rru_A2362	0.10	+2.7
2,753,046	-		Rru_A2362	0.10	-0.8
2,753,046	-		Rru_A2362	0.10	-0.3
2,753,057	+		Rru_A2362	0.13	+2.5
2,753,057	+		Rru_A2362	0.13	-0.1
2,753,058	-		Rru_A2362	0.13	+0.7
2,753,058	-		Rru_A2362	0.13	+0.1
2,753,183	+		Rru_A2362	0.39	-0.4
2,753,201	+		Rru_A2362	0.42	-1.7
2,753,202	-		Rru_A2362	0.43	-0.4
2,753,282	+		Rru_A2362	0.59	-0.2
2,753,283	-		Rru_A2362	0.59	-0.2
2,753,303	+		Rru_A2362	0.64	-0.3
2,753,303	+		Rru_A2362	0.64	+0.6
2,753,303	+		Rru_A2362	0.64	+0.9
2,753,303	+		Rru_A2362	0.64	+0.0
2,753,304	-		Rru_A2362	0.64	-0.0
2,753,304	-		Rru_A2362	0.64	-0.2
2,753,304	-		Rru_A2362	0.64	+1.4
2,753,357	+		Rru_A2362	0.75	+0.1
2,753,357	+		Rru_A2362	0.75	-0.0
2,753,358	-		Rru_A2362	0.75	+0.3
2,753,358	-		Rru_A2362	0.75	-0.6
2,753,358	-		Rru_A2362	0.75	-0.4
2,753,385	+		Rru_A2362	0.81	-0.2
2,753,385	+		Rru_A2362	0.81	+0.2
2,753,386	-		Rru_A2362	0.81	+0.8
2,753,387	+		Rru_A2362	0.81	-0.1
2,753,709	+		Rru_A2363	0.23	-2.2
2,753,710	-		Rru_A2363	0.23	+0.3