Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_21660 and IAI47_21665 are separated by 386 nucleotides IAI47_21665 and IAI47_21670 are separated by 239 nucleotides IAI47_21670 and IAI47_21675 are separated by 32 nucleotides
IAI47_21660: IAI47_21660 - PACE efflux transporter, at 75,363 to 75,800
_21660
IAI47_21665: IAI47_21665 - DUF333 domain-containing protein, at 76,187 to 76,435
_21665
IAI47_21670: IAI47_21670 - LuxR family transcriptional regulator, at 76,675 to 77,310
_21670
IAI47_21675: IAI47_21675 - helix-turn-helix domain-containing protein, at 77,343 to 77,933
_21675
Position (kb) 76
77 Strain fitness (log2 ratio) -2
-1
0
1
2 at 75.197 kb on + strand at 75.198 kb on - strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.237 kb on + strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.238 kb on - strand at 75.281 kb on - strand at 75.281 kb on - strand at 75.281 kb on - strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.291 kb on + strand at 75.292 kb on - strand at 75.305 kb on + strand at 75.305 kb on + strand at 75.305 kb on + strand at 75.306 kb on - strand at 75.306 kb on - strand at 75.306 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.332 kb on - strand at 75.344 kb on + strand at 75.344 kb on + strand at 75.344 kb on + strand at 75.345 kb on - strand at 75.345 kb on - strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.372 kb on + strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.373 kb on - strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.376 kb on + strand at 75.448 kb on + strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.449 kb on - strand, within IAI47_21660 at 75.455 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.540 kb on + strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.541 kb on - strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.643 kb on + strand, within IAI47_21660 at 75.644 kb on - strand, within IAI47_21660 at 75.680 kb on + strand, within IAI47_21660 at 75.681 kb on - strand, within IAI47_21660 at 75.681 kb on - strand, within IAI47_21660 at 75.683 kb on + strand, within IAI47_21660 at 75.683 kb on + strand, within IAI47_21660 at 75.684 kb on - strand, within IAI47_21660 at 75.684 kb on - strand, within IAI47_21660 at 75.744 kb on + strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.745 kb on - strand, within IAI47_21660 at 75.753 kb on - strand, within IAI47_21660 at 75.773 kb on + strand at 75.803 kb on + strand at 75.895 kb on + strand at 76.114 kb on + strand at 76.140 kb on - strand at 76.145 kb on - strand at 76.150 kb on + strand at 76.151 kb on - strand at 76.151 kb on - strand at 76.212 kb on - strand, within IAI47_21665 at 76.331 kb on - strand, within IAI47_21665 at 76.337 kb on + strand, within IAI47_21665 at 76.437 kb on + strand at 76.493 kb on + strand at 76.677 kb on - strand at 76.677 kb on - strand at 76.690 kb on - strand at 76.787 kb on + strand, within IAI47_21670 at 76.788 kb on - strand, within IAI47_21670 at 76.792 kb on - strand, within IAI47_21670 at 76.800 kb on - strand, within IAI47_21670 at 76.830 kb on + strand, within IAI47_21670 at 76.830 kb on + strand, within IAI47_21670 at 76.848 kb on + strand, within IAI47_21670 at 76.849 kb on - strand, within IAI47_21670 at 76.849 kb on - strand, within IAI47_21670 at 76.922 kb on + strand, within IAI47_21670 at 77.033 kb on + strand, within IAI47_21670 at 77.033 kb on + strand, within IAI47_21670 at 77.086 kb on + strand, within IAI47_21670 at 77.089 kb on + strand, within IAI47_21670 at 77.089 kb on + strand, within IAI47_21670 at 77.090 kb on - strand, within IAI47_21670 at 77.090 kb on - strand, within IAI47_21670 at 77.090 kb on - strand, within IAI47_21670 at 77.090 kb on - strand, within IAI47_21670 at 77.091 kb on + strand, within IAI47_21670 at 77.092 kb on - strand, within IAI47_21670 at 77.092 kb on - strand, within IAI47_21670 at 77.133 kb on + strand, within IAI47_21670 at 77.134 kb on - strand, within IAI47_21670 at 77.134 kb on - strand, within IAI47_21670 at 77.134 kb on - strand, within IAI47_21670 at 77.134 kb on - strand, within IAI47_21670 at 77.135 kb on + strand, within IAI47_21670 at 77.135 kb on + strand, within IAI47_21670 at 77.136 kb on - strand, within IAI47_21670 at 77.231 kb on - strand, within IAI47_21670 at 77.231 kb on - strand, within IAI47_21670 at 77.276 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 75,197 + -0.6 75,198 - -0.3 75,237 + +0.2 75,237 + +0.5 75,237 + -0.1 75,237 + -0.3 75,237 + -0.3 75,237 + +1.2 75,237 + -2.0 75,237 + +0.4 75,237 + +0.0 75,238 - +1.1 75,238 - -0.6 75,238 - -1.1 75,238 - +0.4 75,238 - +0.8 75,238 - +1.2 75,238 - -0.2 75,238 - -0.2 75,238 - -1.4 75,238 - -0.1 75,238 - +1.9 75,238 - -1.7 75,238 - -1.2 75,238 - +2.0 75,238 - +0.6 75,238 - +0.1 75,281 - -0.5 75,281 - +0.1 75,281 - +0.1 75,291 + +1.3 75,291 + -0.2 75,291 + +0.5 75,291 + -0.6 75,291 + -0.0 75,291 + -0.9 75,292 - -0.0 75,305 + +0.9 75,305 + +0.2 75,305 + +0.7 75,306 - -0.2 75,306 - -0.4 75,306 - -0.6 75,332 - +2.4 75,332 - -0.0 75,332 - -1.3 75,332 - -2.0 75,344 + -0.1 75,344 + +0.2 75,344 + -0.6 75,345 - -0.5 75,345 - +0.2 75,372 + -0.6 75,372 + -1.4 75,372 + +0.1 75,372 + +0.6 75,372 + -0.1 75,373 - +0.8 75,373 - +1.6 75,373 - +1.4 75,373 - -1.0 75,373 - -0.4 75,376 + +0.3 75,376 + +1.1 75,376 + +1.4 75,376 + +0.2 75,448 + IAI47_21660 0.19 +0.3 75,449 - IAI47_21660 0.20 -0.4 75,449 - IAI47_21660 0.20 +0.6 75,449 - IAI47_21660 0.20 -1.8 75,455 + IAI47_21660 0.21 +0.7 75,540 + IAI47_21660 0.40 +0.1 75,540 + IAI47_21660 0.40 -1.0 75,540 + IAI47_21660 0.40 +0.1 75,541 - IAI47_21660 0.41 -0.2 75,541 - IAI47_21660 0.41 +0.3 75,541 - IAI47_21660 0.41 -0.3 75,541 - IAI47_21660 0.41 +0.7 75,643 + IAI47_21660 0.64 +1.7 75,643 + IAI47_21660 0.64 +0.2 75,643 + IAI47_21660 0.64 +0.7 75,644 - IAI47_21660 0.64 -0.7 75,680 + IAI47_21660 0.72 -1.9 75,681 - IAI47_21660 0.73 +0.4 75,681 - IAI47_21660 0.73 +0.3 75,683 + IAI47_21660 0.73 -0.9 75,683 + IAI47_21660 0.73 +1.6 75,684 - IAI47_21660 0.73 -0.3 75,684 - IAI47_21660 0.73 -0.1 75,744 + IAI47_21660 0.87 +2.0 75,745 - IAI47_21660 0.87 +0.1 75,745 - IAI47_21660 0.87 +0.1 75,745 - IAI47_21660 0.87 -0.7 75,745 - IAI47_21660 0.87 +0.2 75,753 - IAI47_21660 0.89 -1.2 75,773 + +0.2 75,803 + +0.1 75,895 + +0.3 76,114 + +0.8 76,140 - -2.0 76,145 - -1.3 76,150 + -1.2 76,151 - -1.0 76,151 - -0.0 76,212 - IAI47_21665 0.10 -1.2 76,331 - IAI47_21665 0.58 -0.3 76,337 + IAI47_21665 0.60 -1.1 76,437 + -1.2 76,493 + +0.7 76,677 - -1.3 76,677 - +1.9 76,690 - -1.3 76,787 + IAI47_21670 0.18 +0.2 76,788 - IAI47_21670 0.18 +0.6 76,792 - IAI47_21670 0.18 +1.0 76,800 - IAI47_21670 0.20 -0.1 76,830 + IAI47_21670 0.24 +1.8 76,830 + IAI47_21670 0.24 -0.3 76,848 + IAI47_21670 0.27 -0.0 76,849 - IAI47_21670 0.27 -0.4 76,849 - IAI47_21670 0.27 -0.2 76,922 + IAI47_21670 0.39 +1.0 77,033 + IAI47_21670 0.56 -1.7 77,033 + IAI47_21670 0.56 +0.5 77,086 + IAI47_21670 0.65 +0.8 77,089 + IAI47_21670 0.65 -1.3 77,089 + IAI47_21670 0.65 -1.0 77,090 - IAI47_21670 0.65 -0.6 77,090 - IAI47_21670 0.65 +0.6 77,090 - IAI47_21670 0.65 -1.7 77,090 - IAI47_21670 0.65 -1.6 77,091 + IAI47_21670 0.65 -2.6 77,092 - IAI47_21670 0.66 -0.5 77,092 - IAI47_21670 0.66 -2.7 77,133 + IAI47_21670 0.72 -0.6 77,134 - IAI47_21670 0.72 -0.9 77,134 - IAI47_21670 0.72 +1.0 77,134 - IAI47_21670 0.72 +0.2 77,134 - IAI47_21670 0.72 +0.4 77,135 + IAI47_21670 0.72 -1.2 77,135 + IAI47_21670 0.72 +0.3 77,136 - IAI47_21670 0.72 -0.2 77,231 - IAI47_21670 0.87 -0.0 77,231 - IAI47_21670 0.87 -0.2 77,276 + -2.7
Or see this region's nucleotide sequence