Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2652

Experiment: MoLS4 with L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2650 and DVU2651 are separated by 152 nucleotidesDVU2651 and DVU2652 are separated by 192 nucleotidesDVU2652 and dacA are separated by 956 nucleotides DVU2650: DVU2650 - hypothetical protein (TIGR), at 2,765,697 to 2,766,302 DVU2650 DVU2651: DVU2651 - hypothetical protein (TIGR), at 2,766,455 to 2,766,631 DVU2651 DVU2652: DVU2652 - hypothetical protein (TIGR), at 2,766,824 to 2,767,405 DVU2652 DVU2655: dacA - D-alanyl-D-alanine carboxypeptidase family protein (TIGR), at 2,768,362 to 2,769,687 dacA Position (kb) 2766 2767 2768Strain fitness (log2 ratio) -2 -1 0 1 2at 2765.926 kb on + strand, within DVU2650at 2765.964 kb on - strand, within DVU2650at 2765.977 kb on + strand, within DVU2650at 2766.015 kb on + strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.068 kb on - strand, within DVU2650at 2766.437 kb on - strandat 2766.684 kb on + strandat 2766.703 kb on + strandat 2766.918 kb on - strand, within DVU2652at 2767.225 kb on - strand, within DVU2652at 2767.268 kb on + strand, within DVU2652at 2767.373 kb on + strandat 2767.373 kb on + strandat 2767.381 kb on - strandat 2767.438 kb on - strandat 2767.488 kb on + strandat 2767.488 kb on + strandat 2767.496 kb on - strandat 2767.496 kb on - strandat 2767.681 kb on - strandat 2767.720 kb on + strandat 2767.734 kb on - strandat 2767.741 kb on - strandat 2767.762 kb on + strandat 2767.770 kb on - strandat 2767.788 kb on + strandat 2767.788 kb on + strandat 2767.834 kb on + strandat 2767.837 kb on - strandat 2767.845 kb on - strandat 2767.876 kb on - strandat 2767.934 kb on - strandat 2767.963 kb on + strandat 2767.965 kb on + strandat 2767.999 kb on - strandat 2768.012 kb on - strandat 2768.146 kb on + strandat 2768.204 kb on - strandat 2768.212 kb on - strandat 2768.212 kb on - strandat 2768.312 kb on + strandat 2768.331 kb on - strandat 2768.350 kb on - strandat 2768.378 kb on + strandat 2768.386 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Proline (N)
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2,765,926 + DVU2650 0.38 +0.1
2,765,964 - DVU2650 0.44 -1.1
2,765,977 + DVU2650 0.46 +0.4
2,766,015 + DVU2650 0.52 -1.2
2,766,068 - DVU2650 0.61 +0.3
2,766,068 - DVU2650 0.61 -1.0
2,766,437 - -0.8
2,766,684 + -0.3
2,766,703 + +0.1
2,766,918 - DVU2652 0.16 +0.2
2,767,225 - DVU2652 0.69 +0.0
2,767,268 + DVU2652 0.76 +0.4
2,767,373 + +0.2
2,767,373 + -0.0
2,767,381 - -1.4
2,767,438 - -0.8
2,767,488 + -1.5
2,767,488 + +0.3
2,767,496 - -0.8
2,767,496 - -0.2
2,767,681 - +0.2
2,767,720 + +0.7
2,767,734 - +0.3
2,767,741 - +2.3
2,767,762 + -0.3
2,767,770 - -2.5
2,767,788 + -0.7
2,767,788 + +2.3
2,767,834 + +0.5
2,767,837 - -0.9
2,767,845 - -0.7
2,767,876 - -0.1
2,767,934 - -0.6
2,767,963 + -0.7
2,767,965 + -0.3
2,767,999 - -0.4
2,768,012 - +0.3
2,768,146 + -0.4
2,768,204 - -0.3
2,768,212 - -1.9
2,768,212 - -0.1
2,768,312 + +0.1
2,768,331 - +1.0
2,768,350 - -1.8
2,768,378 + +0.1
2,768,386 - -2.1

Or see this region's nucleotide sequence