Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_571 and HP15_572 are separated by 11 nucleotides HP15_572 and HP15_573 are separated by 90 nucleotides HP15_573 and HP15_574 overlap by 4 nucleotides HP15_574 and HP15_575 are separated by 184 nucleotides
HP15_571: HP15_571 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 592,216 to 593,130
_571
HP15_572: HP15_572 - protein containing DUF721, at 593,142 to 593,588
_572
HP15_573: HP15_573 - hypothetical protein, at 593,679 to 593,807
_573
HP15_574: HP15_574 - peptidase M23B, at 593,804 to 594,757
_574
HP15_575: HP15_575 - preprotein translocase, SecA subunit, at 594,942 to 597,680
_575
Position (kb) 593
594
595 Strain fitness (log2 ratio) -1
0
1
2 at 593.140 kb on + strand at 593.658 kb on + strand at 593.722 kb on + strand, within HP15_573 at 593.840 kb on + strand at 594.093 kb on + strand, within HP15_574 at 594.104 kb on + strand, within HP15_574 at 594.233 kb on + strand, within HP15_574 at 594.405 kb on + strand, within HP15_574 at 594.514 kb on - strand, within HP15_574 at 594.606 kb on + strand, within HP15_574 at 594.660 kb on + strand, within HP15_574 at 594.815 kb on + strand at 594.846 kb on - strand at 594.882 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 593,140 + -0.1 593,658 + +0.5 593,722 + HP15_573 0.33 +0.9 593,840 + +1.6 594,093 + HP15_574 0.30 +1.6 594,104 + HP15_574 0.31 +1.4 594,233 + HP15_574 0.45 +1.8 594,405 + HP15_574 0.63 +1.8 594,514 - HP15_574 0.74 +2.0 594,606 + HP15_574 0.84 +1.5 594,660 + HP15_574 0.90 +2.2 594,815 + -0.8 594,846 - -0.5 594,882 - -0.3
Or see this region's nucleotide sequence