Experiment: m.b. Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2413 and HP15_2414 overlap by 1 nucleotides HP15_2414 and HP15_2415 are separated by 43 nucleotides HP15_2415 and HP15_2416 are separated by 95 nucleotides HP15_2416 and HP15_2417 are separated by 112 nucleotides
HP15_2413: HP15_2413 - conserved hypothetical protein, secreted, at 2,547,991 to 2,549,085
_2413
HP15_2414: HP15_2414 - protein containing uncharacterized protein family UPF0066 domains, at 2,549,085 to 2,549,828
_2414
HP15_2415: HP15_2415 - sensory box sensor histidine kinase/response regulator, at 2,549,872 to 2,552,223
_2415
HP15_2416: HP15_2416 - zinc-binding protein, at 2,552,319 to 2,552,474
_2416
HP15_2417: HP15_2417 - YfaZ family protein, at 2,552,587 to 2,553,144
_2417
Position (kb)
2549
2550
2551
2552
2553 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2548.898 kb on - strand, within HP15_2413 at 2549.009 kb on + strand at 2549.017 kb on - strand at 2549.185 kb on + strand, within HP15_2414 at 2549.415 kb on - strand, within HP15_2414 at 2549.556 kb on + strand, within HP15_2414 at 2549.564 kb on - strand, within HP15_2414 at 2549.672 kb on + strand, within HP15_2414 at 2549.748 kb on + strand, within HP15_2414 at 2549.906 kb on - strand at 2549.936 kb on + strand at 2550.054 kb on - strand at 2550.177 kb on - strand, within HP15_2415 at 2550.306 kb on - strand, within HP15_2415 at 2550.316 kb on - strand, within HP15_2415 at 2550.339 kb on - strand, within HP15_2415 at 2550.702 kb on - strand, within HP15_2415 at 2550.702 kb on - strand, within HP15_2415 at 2550.742 kb on - strand, within HP15_2415 at 2551.056 kb on - strand, within HP15_2415 at 2551.058 kb on + strand, within HP15_2415 at 2551.205 kb on + strand, within HP15_2415 at 2551.213 kb on - strand, within HP15_2415 at 2551.405 kb on - strand, within HP15_2415 at 2551.607 kb on - strand, within HP15_2415 at 2551.860 kb on + strand, within HP15_2415 at 2551.936 kb on + strand, within HP15_2415 at 2552.004 kb on - strand at 2552.023 kb on - strand at 2552.298 kb on + strand at 2552.364 kb on - strand, within HP15_2416 at 2552.448 kb on - strand, within HP15_2416 at 2552.468 kb on + strand at 2552.476 kb on - strand at 2552.733 kb on + strand, within HP15_2417 at 2552.862 kb on - strand, within HP15_2417
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.5 mg/ml remove 2,548,898 - HP15_2413 0.83 +0.3 2,549,009 + +0.3 2,549,017 - +0.6 2,549,185 + HP15_2414 0.13 +0.3 2,549,415 - HP15_2414 0.44 +1.1 2,549,556 + HP15_2414 0.63 -0.6 2,549,564 - HP15_2414 0.64 -0.5 2,549,672 + HP15_2414 0.79 +0.2 2,549,748 + HP15_2414 0.89 -0.1 2,549,906 - -0.2 2,549,936 + +0.3 2,550,054 - +0.3 2,550,177 - HP15_2415 0.13 +0.1 2,550,306 - HP15_2415 0.18 -0.3 2,550,316 - HP15_2415 0.19 -0.2 2,550,339 - HP15_2415 0.20 +1.8 2,550,702 - HP15_2415 0.35 +0.6 2,550,702 - HP15_2415 0.35 +0.0 2,550,742 - HP15_2415 0.37 -0.1 2,551,056 - HP15_2415 0.50 -0.1 2,551,058 + HP15_2415 0.50 -0.6 2,551,205 + HP15_2415 0.57 +0.3 2,551,213 - HP15_2415 0.57 +0.1 2,551,405 - HP15_2415 0.65 +0.7 2,551,607 - HP15_2415 0.74 -0.5 2,551,860 + HP15_2415 0.85 -0.2 2,551,936 + HP15_2415 0.88 -0.5 2,552,004 - +0.8 2,552,023 - -0.5 2,552,298 + -0.2 2,552,364 - HP15_2416 0.29 -0.3 2,552,448 - HP15_2416 0.83 +0.8 2,552,468 + -0.1 2,552,476 - -0.1 2,552,733 + HP15_2417 0.26 -3.8 2,552,862 - HP15_2417 0.49 +0.4
Or see this region's nucleotide sequence