Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21115 and BWI76_RS21120 are separated by 32 nucleotides BWI76_RS21120 and BWI76_RS21125 are separated by 96 nucleotides
BWI76_RS21115: BWI76_RS21115 - 3-mercaptopyruvate sulfurtransferase, at 4,423,161 to 4,424,006
_RS21115
BWI76_RS21120: BWI76_RS21120 - enhanced serine sensitivity protein SseB, at 4,424,039 to 4,424,815
_RS21120
BWI76_RS21125: BWI76_RS21125 - aminopeptidase PepB, at 4,424,912 to 4,426,198
_RS21125
Position (kb)
4424
4425 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4423.226 kb on + strand at 4423.482 kb on - strand, within BWI76_RS21115 at 4423.578 kb on - strand, within BWI76_RS21115 at 4423.745 kb on + strand, within BWI76_RS21115 at 4423.980 kb on + strand at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.290 kb on - strand, within BWI76_RS21120 at 4424.290 kb on - strand at 4424.292 kb on - strand, within BWI76_RS21120 at 4424.384 kb on - strand, within BWI76_RS21120 at 4424.529 kb on + strand, within BWI76_RS21120 at 4424.681 kb on - strand, within BWI76_RS21120 at 4425.034 kb on - strand at 4425.226 kb on + strand, within BWI76_RS21125 at 4425.252 kb on + strand, within BWI76_RS21125 at 4425.260 kb on - strand, within BWI76_RS21125 at 4425.260 kb on - strand, within BWI76_RS21125 at 4425.315 kb on - strand, within BWI76_RS21125 at 4425.357 kb on - strand, within BWI76_RS21125 at 4425.734 kb on - strand, within BWI76_RS21125
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 4,423,226 + -0.4 4,423,482 - BWI76_RS21115 0.38 -0.8 4,423,578 - BWI76_RS21115 0.49 +1.1 4,423,745 + BWI76_RS21115 0.69 +0.2 4,423,980 + -0.0 4,424,282 + BWI76_RS21120 0.31 -0.6 4,424,282 + BWI76_RS21120 0.31 -2.4 4,424,282 + BWI76_RS21120 0.31 +0.3 4,424,290 - BWI76_RS21120 0.32 -0.4 4,424,290 - -0.7 4,424,292 - BWI76_RS21120 0.33 -0.2 4,424,384 - BWI76_RS21120 0.44 -1.1 4,424,529 + BWI76_RS21120 0.63 +0.1 4,424,681 - BWI76_RS21120 0.83 -1.5 4,425,034 - +2.2 4,425,226 + BWI76_RS21125 0.24 +0.1 4,425,252 + BWI76_RS21125 0.26 -0.6 4,425,260 - BWI76_RS21125 0.27 +0.3 4,425,260 - BWI76_RS21125 0.27 +0.4 4,425,315 - BWI76_RS21125 0.31 +0.3 4,425,357 - BWI76_RS21125 0.35 +1.1 4,425,734 - BWI76_RS21125 0.64 -0.0
Or see this region's nucleotide sequence