Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21095 and BWI76_RS21100 are separated by 288 nucleotides BWI76_RS21100 and BWI76_RS21105 are separated by 162 nucleotides BWI76_RS21105 and BWI76_RS21110 are separated by 0 nucleotides
BWI76_RS21095: BWI76_RS21095 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN, at 4,413,632 to 4,414,798
_RS21095
BWI76_RS21100: BWI76_RS21100 - nucleoside-diphosphate kinase, at 4,415,087 to 4,415,518
_RS21100
BWI76_RS21105: BWI76_RS21105 - penicillin-binding protein 1C, at 4,415,681 to 4,418,005
_RS21105
BWI76_RS21110: BWI76_RS21110 - hypothetical protein, at 4,418,006 to 4,422,952
_RS21110
Position (kb) 4415
4416
4417
4418
4419 Strain fitness (log2 ratio) -1
0
1 at 4414.713 kb on - strand at 4414.713 kb on - strand at 4414.765 kb on - strand at 4414.961 kb on - strand at 4414.963 kb on - strand at 4415.308 kb on + strand, within BWI76_RS21100 at 4415.391 kb on - strand, within BWI76_RS21100 at 4415.556 kb on - strand at 4415.570 kb on - strand at 4415.775 kb on - strand at 4415.775 kb on - strand at 4415.880 kb on + strand at 4416.032 kb on - strand, within BWI76_RS21105 at 4416.244 kb on - strand, within BWI76_RS21105 at 4416.293 kb on + strand, within BWI76_RS21105 at 4416.663 kb on + strand, within BWI76_RS21105 at 4416.812 kb on - strand, within BWI76_RS21105 at 4417.347 kb on - strand, within BWI76_RS21105 at 4417.859 kb on - strand at 4418.403 kb on - strand at 4418.587 kb on - strand, within BWI76_RS21110 at 4418.675 kb on - strand, within BWI76_RS21110 at 4418.802 kb on + strand, within BWI76_RS21110 at 4418.970 kb on + strand, within BWI76_RS21110
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 4,414,713 - -0.3 4,414,713 - -1.5 4,414,765 - -1.5 4,414,961 - +0.4 4,414,963 - -0.5 4,415,308 + BWI76_RS21100 0.51 +0.1 4,415,391 - BWI76_RS21100 0.70 -0.4 4,415,556 - +0.2 4,415,570 - +0.0 4,415,775 - +0.5 4,415,775 - +1.1 4,415,880 + -0.4 4,416,032 - BWI76_RS21105 0.15 -0.2 4,416,244 - BWI76_RS21105 0.24 -1.0 4,416,293 + BWI76_RS21105 0.26 -0.6 4,416,663 + BWI76_RS21105 0.42 -0.7 4,416,812 - BWI76_RS21105 0.49 -0.5 4,417,347 - BWI76_RS21105 0.72 -1.1 4,417,859 - -0.2 4,418,403 - -1.0 4,418,587 - BWI76_RS21110 0.12 -0.3 4,418,675 - BWI76_RS21110 0.14 +0.0 4,418,802 + BWI76_RS21110 0.16 -1.1 4,418,970 + BWI76_RS21110 0.19 +0.3
Or see this region's nucleotide sequence