Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14485 and BWI76_RS14490 overlap by 4 nucleotides BWI76_RS14490 and BWI76_RS14495 are separated by 134 nucleotides BWI76_RS14495 and BWI76_RS14500 are separated by 32 nucleotides
BWI76_RS14485: BWI76_RS14485 - two-component sensor histidine kinase, at 3,023,414 to 3,025,423
_RS14485
BWI76_RS14490: BWI76_RS14490 - ABC transporter substrate-binding protein, at 3,025,420 to 3,026,691
_RS14490
BWI76_RS14495: BWI76_RS14495 - hypothetical protein, at 3,026,826 to 3,027,014
_RS14495
BWI76_RS14500: BWI76_RS14500 - MFS transporter, at 3,027,047 to 3,028,438
_RS14500
Position (kb)
3025
3026
3027 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3024.910 kb on + strand at 3025.108 kb on - strand, within BWI76_RS14485 at 3025.153 kb on + strand, within BWI76_RS14485 at 3025.161 kb on - strand, within BWI76_RS14485 at 3025.502 kb on + strand at 3025.573 kb on + strand at 3025.842 kb on + strand, within BWI76_RS14490 at 3026.051 kb on - strand, within BWI76_RS14490 at 3026.114 kb on - strand, within BWI76_RS14490 at 3026.237 kb on + strand, within BWI76_RS14490 at 3026.588 kb on - strand at 3026.672 kb on - strand at 3026.711 kb on + strand at 3026.722 kb on + strand at 3026.731 kb on - strand at 3027.016 kb on + strand at 3027.110 kb on + strand at 3027.126 kb on + strand at 3027.157 kb on - strand at 3027.159 kb on + strand at 3027.168 kb on + strand at 3027.173 kb on + strand at 3027.176 kb on - strand at 3027.176 kb on - strand at 3027.176 kb on - strand at 3027.186 kb on + strand at 3027.193 kb on - strand, within BWI76_RS14500 at 3027.196 kb on + strand, within BWI76_RS14500 at 3027.196 kb on + strand, within BWI76_RS14500 at 3027.196 kb on + strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.204 kb on - strand, within BWI76_RS14500 at 3027.218 kb on + strand, within BWI76_RS14500 at 3027.258 kb on + strand, within BWI76_RS14500 at 3027.258 kb on + strand, within BWI76_RS14500 at 3027.266 kb on - strand, within BWI76_RS14500 at 3027.301 kb on - strand, within BWI76_RS14500 at 3027.319 kb on - strand, within BWI76_RS14500 at 3027.353 kb on - strand, within BWI76_RS14500 at 3027.429 kb on - strand, within BWI76_RS14500 at 3027.441 kb on - strand, within BWI76_RS14500 at 3027.675 kb on - strand, within BWI76_RS14500
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 3,024,910 + +0.2 3,025,108 - BWI76_RS14485 0.84 -0.6 3,025,153 + BWI76_RS14485 0.87 +0.1 3,025,161 - BWI76_RS14485 0.87 +0.1 3,025,502 + +0.5 3,025,573 + +2.4 3,025,842 + BWI76_RS14490 0.33 -0.7 3,026,051 - BWI76_RS14490 0.50 -0.6 3,026,114 - BWI76_RS14490 0.55 -0.3 3,026,237 + BWI76_RS14490 0.64 -2.0 3,026,588 - +1.4 3,026,672 - -0.5 3,026,711 + +0.3 3,026,722 + +0.0 3,026,731 - -0.4 3,027,016 + +0.7 3,027,110 + -0.6 3,027,126 + -0.1 3,027,157 - -0.2 3,027,159 + -1.4 3,027,168 + -0.6 3,027,173 + +1.4 3,027,176 - -0.8 3,027,176 - +1.4 3,027,176 - +0.1 3,027,186 + -0.3 3,027,193 - BWI76_RS14500 0.10 +0.4 3,027,196 + BWI76_RS14500 0.11 +0.5 3,027,196 + BWI76_RS14500 0.11 +0.8 3,027,196 + BWI76_RS14500 0.11 +0.8 3,027,204 - BWI76_RS14500 0.11 -0.3 3,027,204 - BWI76_RS14500 0.11 +0.2 3,027,204 - BWI76_RS14500 0.11 -0.4 3,027,204 - BWI76_RS14500 0.11 -0.6 3,027,204 - BWI76_RS14500 0.11 -1.2 3,027,204 - BWI76_RS14500 0.11 +0.4 3,027,218 + BWI76_RS14500 0.12 +0.0 3,027,258 + BWI76_RS14500 0.15 +0.4 3,027,258 + BWI76_RS14500 0.15 -0.1 3,027,266 - BWI76_RS14500 0.16 +0.7 3,027,301 - BWI76_RS14500 0.18 -0.6 3,027,319 - BWI76_RS14500 0.20 -0.7 3,027,353 - BWI76_RS14500 0.22 -1.0 3,027,429 - BWI76_RS14500 0.27 -0.1 3,027,441 - BWI76_RS14500 0.28 +0.2 3,027,675 - BWI76_RS14500 0.45 -0.0
Or see this region's nucleotide sequence