Experiment: LB, pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06855 and BWI76_RS06860 are separated by 233 nucleotides BWI76_RS06860 and BWI76_RS06865 are separated by 163 nucleotides
BWI76_RS06855: BWI76_RS06855 - Kef family K(+) transporter, at 1,438,294 to 1,439,970
_RS06855
BWI76_RS06860: BWI76_RS06860 - MFS transporter, at 1,440,204 to 1,441,424
_RS06860
BWI76_RS06865: BWI76_RS06865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,441,588 to 1,443,240
_RS06865
Position (kb)
1440
1441
1442 Strain fitness (log2 ratio)
-1
0
1 at 1439.238 kb on + strand, within BWI76_RS06855 at 1439.648 kb on + strand, within BWI76_RS06855 at 1439.662 kb on + strand, within BWI76_RS06855 at 1439.918 kb on - strand at 1439.985 kb on + strand at 1440.419 kb on - strand, within BWI76_RS06860 at 1440.501 kb on - strand, within BWI76_RS06860 at 1440.769 kb on + strand, within BWI76_RS06860 at 1440.848 kb on + strand, within BWI76_RS06860 at 1440.991 kb on - strand, within BWI76_RS06860 at 1441.071 kb on + strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.117 kb on - strand, within BWI76_RS06860 at 1441.124 kb on + strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.132 kb on - strand, within BWI76_RS06860 at 1441.214 kb on + strand, within BWI76_RS06860 at 1441.217 kb on - strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.393 kb on + strand at 1441.398 kb on + strand at 1441.503 kb on - strand at 1441.773 kb on + strand, within BWI76_RS06865 at 1442.267 kb on + strand, within BWI76_RS06865
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH5 remove 1,439,238 + BWI76_RS06855 0.56 -0.1 1,439,648 + BWI76_RS06855 0.81 -0.4 1,439,662 + BWI76_RS06855 0.82 -0.2 1,439,918 - +0.1 1,439,985 + +0.1 1,440,419 - BWI76_RS06860 0.18 -0.5 1,440,501 - BWI76_RS06860 0.24 +1.0 1,440,769 + BWI76_RS06860 0.46 +1.7 1,440,848 + BWI76_RS06860 0.53 -0.9 1,440,991 - BWI76_RS06860 0.64 -0.3 1,441,071 + BWI76_RS06860 0.71 -0.3 1,441,117 - BWI76_RS06860 0.75 -0.0 1,441,117 - BWI76_RS06860 0.75 +0.0 1,441,124 + BWI76_RS06860 0.75 -0.6 1,441,132 - BWI76_RS06860 0.76 -0.1 1,441,132 - BWI76_RS06860 0.76 -1.2 1,441,214 + BWI76_RS06860 0.83 -1.0 1,441,217 - -0.0 1,441,393 + +0.8 1,441,393 + +0.1 1,441,393 + +0.8 1,441,398 + -0.7 1,441,503 - -0.7 1,441,773 + BWI76_RS06865 0.11 -0.4 1,442,267 + BWI76_RS06865 0.41 +0.1
Or see this region's nucleotide sequence