Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06860

Experiment: LB, pH5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06855 and BWI76_RS06860 are separated by 233 nucleotidesBWI76_RS06860 and BWI76_RS06865 are separated by 163 nucleotides BWI76_RS06855: BWI76_RS06855 - Kef family K(+) transporter, at 1,438,294 to 1,439,970 _RS06855 BWI76_RS06860: BWI76_RS06860 - MFS transporter, at 1,440,204 to 1,441,424 _RS06860 BWI76_RS06865: BWI76_RS06865 - bifunctional UDP-sugar hydrolase/5'-nucleotidase, at 1,441,588 to 1,443,240 _RS06865 Position (kb) 1440 1441 1442Strain fitness (log2 ratio) -1 0 1at 1439.238 kb on + strand, within BWI76_RS06855at 1439.648 kb on + strand, within BWI76_RS06855at 1439.662 kb on + strand, within BWI76_RS06855at 1439.918 kb on - strandat 1439.985 kb on + strandat 1440.419 kb on - strand, within BWI76_RS06860at 1440.501 kb on - strand, within BWI76_RS06860at 1440.769 kb on + strand, within BWI76_RS06860at 1440.848 kb on + strand, within BWI76_RS06860at 1440.991 kb on - strand, within BWI76_RS06860at 1441.071 kb on + strand, within BWI76_RS06860at 1441.117 kb on - strand, within BWI76_RS06860at 1441.117 kb on - strand, within BWI76_RS06860at 1441.124 kb on + strand, within BWI76_RS06860at 1441.132 kb on - strand, within BWI76_RS06860at 1441.132 kb on - strand, within BWI76_RS06860at 1441.214 kb on + strand, within BWI76_RS06860at 1441.217 kb on - strandat 1441.393 kb on + strandat 1441.393 kb on + strandat 1441.393 kb on + strandat 1441.398 kb on + strandat 1441.503 kb on - strandat 1441.773 kb on + strand, within BWI76_RS06865at 1442.267 kb on + strand, within BWI76_RS06865

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, pH5
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1,439,238 + BWI76_RS06855 0.56 -0.1
1,439,648 + BWI76_RS06855 0.81 -0.4
1,439,662 + BWI76_RS06855 0.82 -0.2
1,439,918 - +0.1
1,439,985 + +0.1
1,440,419 - BWI76_RS06860 0.18 -0.5
1,440,501 - BWI76_RS06860 0.24 +1.0
1,440,769 + BWI76_RS06860 0.46 +1.7
1,440,848 + BWI76_RS06860 0.53 -0.9
1,440,991 - BWI76_RS06860 0.64 -0.3
1,441,071 + BWI76_RS06860 0.71 -0.3
1,441,117 - BWI76_RS06860 0.75 -0.0
1,441,117 - BWI76_RS06860 0.75 +0.0
1,441,124 + BWI76_RS06860 0.75 -0.6
1,441,132 - BWI76_RS06860 0.76 -0.1
1,441,132 - BWI76_RS06860 0.76 -1.2
1,441,214 + BWI76_RS06860 0.83 -1.0
1,441,217 - -0.0
1,441,393 + +0.8
1,441,393 + +0.1
1,441,393 + +0.8
1,441,398 + -0.7
1,441,503 - -0.7
1,441,773 + BWI76_RS06865 0.11 -0.4
1,442,267 + BWI76_RS06865 0.41 +0.1

Or see this region's nucleotide sequence