Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0031

Experiment: Succinate (C)_noKan

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinate (C)_noKan
29,653	-		Rru_B0030	0.48	+0.0
29,690	+		Rru_B0030	0.50	+0.6
29,731	+		Rru_B0030	0.53	-0.2
29,731	+		Rru_B0030	0.53	-0.4
29,731	+		Rru_B0030	0.53	+0.2
29,732	-		Rru_B0030	0.53	-0.2
29,732	-		Rru_B0030	0.53	-0.4
29,732	-		Rru_B0030	0.53	-1.1
29,737	+		Rru_B0030	0.54	+0.0
29,737	+		Rru_B0030	0.54	+0.6
29,737	+		Rru_B0030	0.54	-0.2
29,737	+		Rru_B0030	0.54	-0.9
29,738	-		Rru_B0030	0.54	+1.4
29,738	-		Rru_B0030	0.54	+0.2
29,738	-		Rru_B0030	0.54	-0.3
29,738	-		Rru_B0030	0.54	-1.3
29,738	-		Rru_B0030	0.54	+0.1
29,738	-		Rru_B0030	0.54	-0.5
29,738	-		Rru_B0030	0.54	+0.1
29,738	-		Rru_B0030	0.54	+0.1
29,738	-		Rru_B0030	0.54	-0.2
29,738	-		Rru_B0030	0.54	-0.9
29,738	-		Rru_B0030	0.54	+1.4
29,840	+		Rru_B0030	0.61	-1.9
29,854	+		Rru_B0030	0.62	-0.2
29,854	+		Rru_B0030	0.62	-0.4
29,855	-		Rru_B0030	0.62	-0.3
29,855	-		Rru_B0030	0.62	+1.4
29,855	-		Rru_B0030	0.62	+0.4
29,855	-		Rru_B0030	0.62	+2.1
29,855	-		Rru_B0030	0.62	+0.5
29,855	-		Rru_B0030	0.62	+1.7
29,855	-		Rru_B0030	0.62	+0.4
29,954	+		Rru_B0030	0.69	+0.5
29,954	+		Rru_B0030	0.69	+0.6
29,954	+		Rru_B0030	0.69	+0.0
29,954	+		Rru_B0030	0.69	+0.0
29,955	-		Rru_B0030	0.70	+0.2
29,955	-		Rru_B0030	0.70	+0.1
29,955	-		Rru_B0030	0.70	+2.4
29,955	-		Rru_B0030	0.70	+0.3
29,955	-		Rru_B0030	0.70	-0.5
29,955	-		Rru_B0030	0.70	+1.2
29,956	+		Rru_B0030	0.70	-0.2
29,956	+		Rru_B0030	0.70	+0.1
29,956	+		Rru_B0030	0.70	+1.2
29,956	+		Rru_B0030	0.70	-0.7
29,956	+		Rru_B0030	0.70	+0.4
29,956	+		Rru_B0030	0.70	+0.3
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	+1.0
29,957	-		Rru_B0030	0.70	-0.2
29,957	-		Rru_B0030	0.70	+0.6
29,957	-		Rru_B0030	0.70	-0.1
29,957	-		Rru_B0030	0.70	+0.8
29,957	-		Rru_B0030	0.70	-0.3
30,025	+		Rru_B0030	0.75	+1.4
30,026	-		Rru_B0030	0.75	-0.2
30,071	+		Rru_B0030	0.78	+0.1
30,071	+		Rru_B0030	0.78	-0.0
30,083	-		Rru_B0030	0.79	+2.4
30,113	+		Rru_B0030	0.81	-0.6
30,114	-		Rru_B0030	0.81	-0.4
30,114	-		Rru_B0030	0.81	+1.2
30,150	-		Rru_B0030	0.84	+0.6
30,151	+		Rru_B0030	0.84	+0.4
30,151	+		Rru_B0030	0.84	-0.5
30,151	+		Rru_B0030	0.84	-0.2
30,151	+		Rru_B0030	0.84	-1.4
30,152	-		Rru_B0030	0.84	+0.2
30,152	-		Rru_B0030	0.84	-0.9
30,174	+		Rru_B0030	0.85	-0.2
30,174	+		Rru_B0030	0.85	+0.2
30,174	+		Rru_B0030	0.85	-0.6
30,175	-		Rru_B0030	0.85	+0.1
30,175	-		Rru_B0030	0.85	+0.2
30,208	+		Rru_B0030	0.88	+0.9
30,208	+		Rru_B0030	0.88	+1.2
30,209	-		Rru_B0030	0.88	-0.6
30,209	-		Rru_B0030	0.88	+0.1
30,211	+		Rru_B0030	0.88	+1.2
30,211	+		Rru_B0030	0.88	+0.1
30,211	+		Rru_B0030	0.88	-0.2
30,211	+		Rru_B0030	0.88	+0.6
30,211	+		Rru_B0030	0.88	+0.1
30,211	+		Rru_B0030	0.88	+0.2
30,211	+		Rru_B0030	0.88	+0.3
30,212	-		Rru_B0030	0.88	+1.3
30,277	+				-0.7
30,277	+				-0.8
30,278	-				-0.6
30,325	+				+0.4
30,337	+				+1.4
30,337	+				-0.2
30,369	-				-0.4
30,369	-				-0.3
30,369	-				-0.1
30,371	+				-0.2
30,385	-				+0.6
30,432	+				-0.5
30,432	+				+1.4
30,483	+				-0.4
30,483	+				-0.1
30,484	-				-1.8
30,484	-				+2.4
30,484	-				-0.2
30,677	+		Rru_B0031	0.14	+1.8
30,677	+		Rru_B0031	0.14	-0.8
30,677	+		Rru_B0031	0.14	+0.1
30,677	+		Rru_B0031	0.14	-0.1
30,677	+		Rru_B0031	0.14	-0.7
30,678	-		Rru_B0031	0.14	+0.5
30,954	+		Rru_B0031	0.32	+2.4
30,955	-		Rru_B0031	0.32	+0.8
30,955	-		Rru_B0031	0.32	+0.3
31,102	+		Rru_B0031	0.42	+0.4
31,102	+		Rru_B0031	0.42	+1.7
31,103	-		Rru_B0031	0.42	+2.4
31,103	-		Rru_B0031	0.42	+0.3
31,131	+		Rru_B0031	0.44	+0.4
31,131	+		Rru_B0031	0.44	-1.1
31,131	+		Rru_B0031	0.44	-0.1
31,132	-		Rru_B0031	0.44	-1.3
31,132	-		Rru_B0031	0.44	-0.6
31,132	-		Rru_B0031	0.44	+0.2
31,291	-		Rru_B0031	0.54	+1.2
31,291	-		Rru_B0031	0.54	-0.2
31,317	+		Rru_B0031	0.56	-1.3
31,318	-		Rru_B0031	0.56	-0.1
31,318	-		Rru_B0031	0.56	-0.4
31,332	+		Rru_B0031	0.57	-0.2
31,332	+		Rru_B0031	0.57	+0.4
31,332	+		Rru_B0031	0.57	-0.7
31,332	+		Rru_B0031	0.57	-0.7
31,332	+		Rru_B0031	0.57	+0.1
31,332	+		Rru_B0031	0.57	-0.1
31,332	+		Rru_B0031	0.57	+1.0
31,395	+		Rru_B0031	0.61	-1.7
31,395	+		Rru_B0031	0.61	+2.4
31,396	-		Rru_B0031	0.61	-0.0
31,539	+		Rru_B0031	0.70	+0.0
31,539	+		Rru_B0031	0.70	+2.4
31,539	+		Rru_B0031	0.70	-0.4
31,539	+		Rru_B0031	0.70	-1.3
31,540	-		Rru_B0031	0.70	+0.4
31,540	-		Rru_B0031	0.70	-0.7
31,540	-		Rru_B0031	0.70	+0.7
31,540	-		Rru_B0031	0.70	-0.4
31,548	+		Rru_B0031	0.71	+0.1
31,548	+		Rru_B0031	0.71	+0.1
31,548	+		Rru_B0031	0.71	-0.6
31,548	+		Rru_B0031	0.71	-0.7
31,548	+		Rru_B0031	0.71	+0.8
31,549	-		Rru_B0031	0.71	+0.0
31,549	-		Rru_B0031	0.71	-0.3
31,549	-		Rru_B0031	0.71	-0.5
31,549	-		Rru_B0031	0.71	+0.8
31,626	+		Rru_B0031	0.76	-1.8
31,626	+		Rru_B0031	0.76	+0.4
31,626	+		Rru_B0031	0.76	-0.4
31,626	+		Rru_B0031	0.76	+0.4
31,626	+		Rru_B0031	0.76	-0.1
31,626	+		Rru_B0031	0.76	-0.2
31,626	+		Rru_B0031	0.76	+0.7
31,627	-		Rru_B0031	0.76	-0.0
31,627	-		Rru_B0031	0.76	-0.4
31,627	-		Rru_B0031	0.76	-0.5
31,627	-		Rru_B0031	0.76	+0.1
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	-0.7
31,627	-		Rru_B0031	0.76	-0.3
31,627	-		Rru_B0031	0.76	-0.3
31,627	-		Rru_B0031	0.76	-0.4
31,627	-		Rru_B0031	0.76	+0.2
31,627	-		Rru_B0031	0.76	-0.5
31,627	-		Rru_B0031	0.76	-0.2
31,627	-		Rru_B0031	0.76	-0.1
31,854	+				+0.9
31,938	+				+0.4
31,939	-				-0.1
31,951	+				+0.4
31,951	+				+0.1
31,951	+				-1.2
31,951	+				-0.4
31,951	+				+0.2
31,952	-				-1.3
31,952	-				+0.2
31,952	-				-0.4
31,953	+				+0.4
31,954	-				+1.0
31,971	+				-0.4
31,971	+				+0.2
31,971	+				-0.3
31,971	+				+0.8
31,971	+				-0.8
31,971	+				-0.1
31,971	+				+0.1
31,972	-				-0.2
31,972	-				-1.0
31,972	-				+0.4
31,972	-				-0.1
31,972	-				+0.6
31,972	-				+0.3
32,013	+				+0.4
32,013	+				+0.2
32,014	-				-0.4
32,029	+				-0.9
32,030	-				-0.4
32,030	-				-0.1
32,058	+				+0.7
32,059	-				+0.2
32,059	-				-0.1
32,128	+		Rru_B0032	0.17	+1.2
32,129	-		Rru_B0032	0.17	-0.5
32,129	-		Rru_B0032	0.17	+1.4
32,180	+		Rru_B0032	0.34	-1.2
32,180	+		Rru_B0032	0.34	+1.1
32,180	+		Rru_B0032	0.34	+0.3
32,180	+		Rru_B0032	0.34	+2.0
32,180	+		Rru_B0032	0.34	+0.1
32,181	-		Rru_B0032	0.35	+0.5
32,181	-		Rru_B0032	0.35	-0.1
32,181	-		Rru_B0032	0.35	-0.1
32,181	-		Rru_B0032	0.35	+0.4
32,239	+		Rru_B0032	0.54	+1.4
32,239	+		Rru_B0032	0.54	+0.0
32,240	-		Rru_B0032	0.54	+1.6
32,381	+				+1.0
32,381	+				-0.4
32,381	+				-0.4
32,381	+				+0.7
32,381	+				+2.6
32,382	-				+1.4
32,417	+				+0.8
32,418	-				-0.2
32,492	+				-0.2
32,502	-				+0.8
32,711	-		Rru_B0033	0.32	+0.2
32,711	-		Rru_B0033	0.32	-0.2
32,764	+		Rru_B0033	0.40	-0.4
32,819	+		Rru_B0033	0.48	+0.9
32,819	+		Rru_B0033	0.48	+0.8
32,820	-		Rru_B0033	0.48	-0.9
32,820	-		Rru_B0033	0.48	+0.8
32,828	+		Rru_B0033	0.49	+0.1
32,828	+		Rru_B0033	0.49	+0.3
32,828	+		Rru_B0033	0.49	+1.0
32,829	-		Rru_B0033	0.49	+0.0
32,830	+		Rru_B0033	0.49	+1.1
32,831	-		Rru_B0033	0.49	+0.6
32,831	-		Rru_B0033	0.49	-0.2
32,831	-		Rru_B0033	0.49	+1.0
32,831	-		Rru_B0033	0.49	+2.0
32,831	-		Rru_B0033	0.49	-0.8
32,851	+		Rru_B0033	0.52	+0.1
32,851	+		Rru_B0033	0.52	-0.7
32,851	+		Rru_B0033	0.52	+0.3
32,852	-		Rru_B0033	0.52	+2.2
32,852	-		Rru_B0033	0.52	-0.5
32,867	+		Rru_B0033	0.55	-0.0
32,867	+		Rru_B0033	0.55	-0.3
32,868	-		Rru_B0033	0.55	-1.1
32,868	-		Rru_B0033	0.55	-0.0
32,869	+		Rru_B0033	0.55	+0.7
32,869	+		Rru_B0033	0.55	+0.0
32,869	+		Rru_B0033	0.55	-0.3
32,869	+		Rru_B0033	0.55	+0.3
32,869	+		Rru_B0033	0.55	-0.7
32,870	-		Rru_B0033	0.55	+1.4
32,870	-		Rru_B0033	0.55	+0.3
32,870	-		Rru_B0033	0.55	-0.2
32,870	-		Rru_B0033	0.55	-0.5
32,881	+		Rru_B0033	0.56	+2.2
32,881	+		Rru_B0033	0.56	-1.2
32,881	+		Rru_B0033	0.56	+0.0
32,881	+		Rru_B0033	0.56	+0.8
32,881	+		Rru_B0033	0.56	+0.7
32,881	+		Rru_B0033	0.56	-0.2
32,882	-		Rru_B0033	0.57	-0.8
32,929	+		Rru_B0033	0.63	-1.3
32,929	+		Rru_B0033	0.63	-0.2
32,929	+		Rru_B0033	0.63	+0.5
32,930	-		Rru_B0033	0.63	+0.2
32,930	-		Rru_B0033	0.63	-0.1
32,930	-		Rru_B0033	0.63	-0.7
32,930	-		Rru_B0033	0.63	+1.4
32,930	-		Rru_B0033	0.63	+0.6