Experiment: Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Xcc-8004.3983.1 and Xcc-8004.3984.1 are separated by 207 nucleotides Xcc-8004.3984.1 and Xcc-8004.3986.1 are separated by 187 nucleotides Xcc-8004.3986.1 and Xcc-8004.3987.1 overlap by 4 nucleotides
Xcc-8004.3983.1: Xcc-8004.3983.1 - FIG01212198: hypothetical protein, at 3,863,425 to 3,863,754
Xcc-8004.3983.1
Xcc-8004.3984.1: Xcc-8004.3984.1 - putative; ORF located using Glimmer/Genemark, at 3,863,962 to 3,864,396
Xcc-8004.3984.1
Xcc-8004.3986.1: Xcc-8004.3986.1 - hypothetical protein, at 3,864,584 to 3,865,318
Xcc-8004.3986.1
Xcc-8004.3987.1: Xcc-8004.3987.1 - hypothetical protein, at 3,865,315 to 3,866,190
Xcc-8004.3987.1
Position (kb) 3864
3865
3866 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 3863.815 kb on + strand at 3863.920 kb on - strand at 3863.920 kb on - strand at 3864.092 kb on + strand, within Xcc-8004.3984.1 at 3864.092 kb on + strand, within Xcc-8004.3984.1 at 3864.092 kb on + strand, within Xcc-8004.3984.1 at 3864.092 kb on + strand, within Xcc-8004.3984.1 at 3864.093 kb on - strand, within Xcc-8004.3984.1 at 3864.093 kb on - strand, within Xcc-8004.3984.1 at 3864.093 kb on - strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.134 kb on + strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.135 kb on - strand, within Xcc-8004.3984.1 at 3864.180 kb on + strand, within Xcc-8004.3984.1 at 3864.206 kb on - strand, within Xcc-8004.3984.1 at 3864.325 kb on + strand, within Xcc-8004.3984.1 at 3864.326 kb on - strand, within Xcc-8004.3984.1 at 3864.367 kb on + strand at 3864.367 kb on + strand at 3864.367 kb on + strand at 3864.368 kb on - strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.377 kb on + strand at 3864.378 kb on - strand at 3864.378 kb on - strand at 3864.378 kb on - strand at 3864.478 kb on + strand at 3864.478 kb on + strand at 3864.479 kb on - strand at 3864.479 kb on - strand at 3864.479 kb on - strand at 3864.479 kb on - strand at 3864.493 kb on - strand at 3864.493 kb on - strand at 3864.514 kb on + strand at 3864.515 kb on - strand at 3864.533 kb on + strand at 3864.533 kb on + strand at 3864.536 kb on + strand at 3864.536 kb on + strand at 3864.537 kb on - strand at 3864.553 kb on + strand at 3864.553 kb on + strand at 3864.553 kb on + strand at 3864.553 kb on + strand at 3864.553 kb on + strand at 3864.554 kb on - strand at 3864.554 kb on - strand at 3864.561 kb on + strand at 3864.561 kb on + strand at 3864.569 kb on - strand at 3864.569 kb on - strand at 3864.585 kb on + strand at 3864.585 kb on + strand at 3864.586 kb on - strand at 3864.586 kb on - strand at 3865.387 kb on - strand at 3865.387 kb on - strand at 3865.396 kb on + strand at 3865.408 kb on - strand, within Xcc-8004.3987.1 at 3865.408 kb on - strand, within Xcc-8004.3987.1 at 3865.429 kb on - strand, within Xcc-8004.3987.1 at 3865.429 kb on - strand, within Xcc-8004.3987.1 at 3865.457 kb on - strand, within Xcc-8004.3987.1 at 3865.463 kb on + strand, within Xcc-8004.3987.1 at 3865.474 kb on - strand, within Xcc-8004.3987.1 at 3865.474 kb on - strand, within Xcc-8004.3987.1 at 3865.565 kb on + strand, within Xcc-8004.3987.1 at 3865.565 kb on + strand, within Xcc-8004.3987.1 at 3865.565 kb on + strand, within Xcc-8004.3987.1 at 3865.609 kb on + strand, within Xcc-8004.3987.1 at 3865.635 kb on + strand, within Xcc-8004.3987.1 at 3865.635 kb on + strand, within Xcc-8004.3987.1 at 3865.639 kb on + strand, within Xcc-8004.3987.1 at 3865.640 kb on - strand, within Xcc-8004.3987.1 at 3865.640 kb on - strand, within Xcc-8004.3987.1 at 3865.673 kb on + strand, within Xcc-8004.3987.1 at 3865.673 kb on + strand, within Xcc-8004.3987.1 at 3865.673 kb on + strand, within Xcc-8004.3987.1 at 3865.673 kb on + strand, within Xcc-8004.3987.1 at 3865.673 kb on + strand, within Xcc-8004.3987.1 at 3865.674 kb on - strand, within Xcc-8004.3987.1 at 3865.674 kb on - strand, within Xcc-8004.3987.1 at 3865.719 kb on + strand, within Xcc-8004.3987.1 at 3865.720 kb on - strand, within Xcc-8004.3987.1 at 3865.720 kb on - strand, within Xcc-8004.3987.1 at 3865.755 kb on - strand, within Xcc-8004.3987.1 at 3865.755 kb on - strand, within Xcc-8004.3987.1 at 3865.831 kb on - strand, within Xcc-8004.3987.1 at 3865.875 kb on + strand, within Xcc-8004.3987.1 at 3865.884 kb on + strand, within Xcc-8004.3987.1 at 3865.988 kb on + strand, within Xcc-8004.3987.1 at 3865.988 kb on + strand, within Xcc-8004.3987.1 at 3865.988 kb on + strand, within Xcc-8004.3987.1 at 3865.988 kb on + strand, within Xcc-8004.3987.1 at 3865.988 kb on + strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3865.989 kb on - strand, within Xcc-8004.3987.1 at 3866.001 kb on + strand, within Xcc-8004.3987.1 at 3866.001 kb on + strand, within Xcc-8004.3987.1 at 3866.001 kb on + strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.002 kb on - strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.003 kb on + strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.004 kb on - strand, within Xcc-8004.3987.1 at 3866.007 kb on + strand, within Xcc-8004.3987.1 at 3866.007 kb on + strand, within Xcc-8004.3987.1 at 3866.007 kb on + strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.008 kb on - strand, within Xcc-8004.3987.1 at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.190 kb on + strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.191 kb on - strand at 3866.222 kb on + strand at 3866.222 kb on + strand at 3866.222 kb on + strand at 3866.223 kb on - strand at 3866.223 kb on - strand at 3866.223 kb on - strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.281 kb on + strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand at 3866.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant remove 3,863,815 + -0.4 3,863,920 - -0.6 3,863,920 - -0.5 3,864,092 + Xcc-8004.3984.1 0.30 -0.4 3,864,092 + Xcc-8004.3984.1 0.30 -0.7 3,864,092 + Xcc-8004.3984.1 0.30 -0.3 3,864,092 + Xcc-8004.3984.1 0.30 -2.5 3,864,093 - Xcc-8004.3984.1 0.30 +0.4 3,864,093 - Xcc-8004.3984.1 0.30 +0.5 3,864,093 - Xcc-8004.3984.1 0.30 -0.9 3,864,134 + Xcc-8004.3984.1 0.40 -0.7 3,864,134 + Xcc-8004.3984.1 0.40 +1.4 3,864,134 + Xcc-8004.3984.1 0.40 -0.8 3,864,134 + Xcc-8004.3984.1 0.40 +0.9 3,864,134 + Xcc-8004.3984.1 0.40 +1.9 3,864,134 + Xcc-8004.3984.1 0.40 -0.4 3,864,134 + Xcc-8004.3984.1 0.40 -0.9 3,864,134 + Xcc-8004.3984.1 0.40 +0.1 3,864,135 - Xcc-8004.3984.1 0.40 -1.1 3,864,135 - Xcc-8004.3984.1 0.40 +0.6 3,864,135 - Xcc-8004.3984.1 0.40 +0.4 3,864,135 - Xcc-8004.3984.1 0.40 -0.8 3,864,135 - Xcc-8004.3984.1 0.40 -0.5 3,864,135 - Xcc-8004.3984.1 0.40 +0.2 3,864,135 - Xcc-8004.3984.1 0.40 +1.6 3,864,135 - Xcc-8004.3984.1 0.40 -0.9 3,864,135 - Xcc-8004.3984.1 0.40 +0.7 3,864,180 + Xcc-8004.3984.1 0.50 +1.1 3,864,206 - Xcc-8004.3984.1 0.56 -0.4 3,864,325 + Xcc-8004.3984.1 0.83 -1.2 3,864,326 - Xcc-8004.3984.1 0.84 -0.4 3,864,367 + -0.0 3,864,367 + +0.0 3,864,367 + -0.1 3,864,368 - +0.5 3,864,377 + -0.6 3,864,377 + -1.2 3,864,377 + +0.8 3,864,377 + +0.3 3,864,377 + -0.8 3,864,377 + +0.7 3,864,377 + -0.0 3,864,377 + +1.4 3,864,378 - +0.7 3,864,378 - +1.2 3,864,378 - -0.2 3,864,478 + +0.7 3,864,478 + +0.2 3,864,479 - +1.2 3,864,479 - +1.1 3,864,479 - +1.7 3,864,479 - +0.2 3,864,493 - -0.3 3,864,493 - +0.7 3,864,514 + +0.2 3,864,515 - -0.1 3,864,533 + -0.8 3,864,533 + -1.3 3,864,536 + -1.8 3,864,536 + +0.1 3,864,537 - +0.7 3,864,553 + +2.1 3,864,553 + -0.6 3,864,553 + -0.9 3,864,553 + +2.0 3,864,553 + +2.4 3,864,554 - -1.8 3,864,554 - +0.3 3,864,561 + -0.5 3,864,561 + +0.6 3,864,569 - +1.4 3,864,569 - -2.6 3,864,585 + -1.1 3,864,585 + +0.2 3,864,586 - +0.3 3,864,586 - -0.2 3,865,387 - +0.5 3,865,387 - -0.0 3,865,396 + -1.5 3,865,408 - Xcc-8004.3987.1 0.11 +0.7 3,865,408 - Xcc-8004.3987.1 0.11 -0.4 3,865,429 - Xcc-8004.3987.1 0.13 -0.3 3,865,429 - Xcc-8004.3987.1 0.13 -0.3 3,865,457 - Xcc-8004.3987.1 0.16 -0.6 3,865,463 + Xcc-8004.3987.1 0.17 +2.4 3,865,474 - Xcc-8004.3987.1 0.18 -1.2 3,865,474 - Xcc-8004.3987.1 0.18 +1.8 3,865,565 + Xcc-8004.3987.1 0.29 +1.1 3,865,565 + Xcc-8004.3987.1 0.29 +0.5 3,865,565 + Xcc-8004.3987.1 0.29 -0.5 3,865,609 + Xcc-8004.3987.1 0.34 +1.1 3,865,635 + Xcc-8004.3987.1 0.37 +0.7 3,865,635 + Xcc-8004.3987.1 0.37 +0.4 3,865,639 + Xcc-8004.3987.1 0.37 +0.2 3,865,640 - Xcc-8004.3987.1 0.37 +1.2 3,865,640 - Xcc-8004.3987.1 0.37 +0.0 3,865,673 + Xcc-8004.3987.1 0.41 +1.1 3,865,673 + Xcc-8004.3987.1 0.41 -1.0 3,865,673 + Xcc-8004.3987.1 0.41 +0.6 3,865,673 + Xcc-8004.3987.1 0.41 +1.5 3,865,673 + Xcc-8004.3987.1 0.41 +1.0 3,865,674 - Xcc-8004.3987.1 0.41 -0.1 3,865,674 - Xcc-8004.3987.1 0.41 -0.1 3,865,719 + Xcc-8004.3987.1 0.46 -0.5 3,865,720 - Xcc-8004.3987.1 0.46 +1.1 3,865,720 - Xcc-8004.3987.1 0.46 +0.2 3,865,755 - Xcc-8004.3987.1 0.50 -0.1 3,865,755 - Xcc-8004.3987.1 0.50 -2.4 3,865,831 - Xcc-8004.3987.1 0.59 +0.1 3,865,875 + Xcc-8004.3987.1 0.64 -0.3 3,865,884 + Xcc-8004.3987.1 0.65 +0.1 3,865,988 + Xcc-8004.3987.1 0.77 +1.1 3,865,988 + Xcc-8004.3987.1 0.77 +0.6 3,865,988 + Xcc-8004.3987.1 0.77 +1.7 3,865,988 + Xcc-8004.3987.1 0.77 +1.9 3,865,988 + Xcc-8004.3987.1 0.77 +0.4 3,865,989 - Xcc-8004.3987.1 0.77 -1.8 3,865,989 - Xcc-8004.3987.1 0.77 -0.4 3,865,989 - Xcc-8004.3987.1 0.77 +0.4 3,865,989 - Xcc-8004.3987.1 0.77 +0.0 3,865,989 - Xcc-8004.3987.1 0.77 +0.1 3,865,989 - Xcc-8004.3987.1 0.77 +1.0 3,865,989 - Xcc-8004.3987.1 0.77 -0.4 3,866,001 + Xcc-8004.3987.1 0.78 +1.5 3,866,001 + Xcc-8004.3987.1 0.78 +2.8 3,866,001 + Xcc-8004.3987.1 0.78 +0.9 3,866,002 - Xcc-8004.3987.1 0.78 +0.7 3,866,002 - Xcc-8004.3987.1 0.78 -1.0 3,866,002 - Xcc-8004.3987.1 0.78 -0.1 3,866,002 - Xcc-8004.3987.1 0.78 -1.7 3,866,002 - Xcc-8004.3987.1 0.78 +0.2 3,866,002 - Xcc-8004.3987.1 0.78 +0.1 3,866,002 - Xcc-8004.3987.1 0.78 +0.8 3,866,002 - Xcc-8004.3987.1 0.78 -0.4 3,866,002 - Xcc-8004.3987.1 0.78 +0.4 3,866,002 - Xcc-8004.3987.1 0.78 -1.1 3,866,002 - Xcc-8004.3987.1 0.78 -0.8 3,866,002 - Xcc-8004.3987.1 0.78 -1.4 3,866,002 - Xcc-8004.3987.1 0.78 +0.8 3,866,003 + Xcc-8004.3987.1 0.79 -0.7 3,866,003 + Xcc-8004.3987.1 0.79 -2.4 3,866,003 + Xcc-8004.3987.1 0.79 +0.1 3,866,003 + Xcc-8004.3987.1 0.79 +1.0 3,866,003 + Xcc-8004.3987.1 0.79 +0.1 3,866,003 + Xcc-8004.3987.1 0.79 -0.4 3,866,003 + Xcc-8004.3987.1 0.79 +0.4 3,866,004 - Xcc-8004.3987.1 0.79 -0.2 3,866,004 - Xcc-8004.3987.1 0.79 -0.8 3,866,004 - Xcc-8004.3987.1 0.79 -1.8 3,866,004 - Xcc-8004.3987.1 0.79 -0.4 3,866,004 - Xcc-8004.3987.1 0.79 -1.3 3,866,004 - Xcc-8004.3987.1 0.79 +0.3 3,866,004 - Xcc-8004.3987.1 0.79 +0.6 3,866,004 - Xcc-8004.3987.1 0.79 +0.1 3,866,004 - Xcc-8004.3987.1 0.79 +0.3 3,866,004 - Xcc-8004.3987.1 0.79 +0.9 3,866,004 - Xcc-8004.3987.1 0.79 -0.9 3,866,007 + Xcc-8004.3987.1 0.79 +0.1 3,866,007 + Xcc-8004.3987.1 0.79 -0.3 3,866,007 + Xcc-8004.3987.1 0.79 +0.8 3,866,008 - Xcc-8004.3987.1 0.79 -1.2 3,866,008 - Xcc-8004.3987.1 0.79 +0.4 3,866,008 - Xcc-8004.3987.1 0.79 -0.3 3,866,008 - Xcc-8004.3987.1 0.79 -0.5 3,866,008 - Xcc-8004.3987.1 0.79 -0.4 3,866,008 - Xcc-8004.3987.1 0.79 +1.0 3,866,008 - Xcc-8004.3987.1 0.79 +0.1 3,866,008 - Xcc-8004.3987.1 0.79 -1.0 3,866,190 + +0.5 3,866,190 + -1.3 3,866,190 + +0.4 3,866,190 + -1.4 3,866,190 + +0.8 3,866,190 + +1.5 3,866,190 + -0.3 3,866,190 + +0.7 3,866,190 + -2.0 3,866,190 + -0.0 3,866,190 + +1.0 3,866,190 + +0.5 3,866,190 + +0.4 3,866,190 + -1.0 3,866,190 + +0.3 3,866,190 + -1.1 3,866,190 + +0.7 3,866,190 + -2.0 3,866,191 - +0.9 3,866,191 - +1.6 3,866,191 - +0.2 3,866,191 - -1.9 3,866,191 - +0.2 3,866,191 - +1.0 3,866,191 - +0.1 3,866,191 - +0.0 3,866,191 - -0.6 3,866,191 - +0.3 3,866,191 - +0.6 3,866,191 - +0.8 3,866,191 - +0.3 3,866,191 - -1.4 3,866,191 - -0.3 3,866,191 - +1.3 3,866,191 - -0.5 3,866,191 - -2.4 3,866,191 - -0.6 3,866,191 - -0.3 3,866,191 - -0.4 3,866,222 + -0.0 3,866,222 + +0.3 3,866,222 + +0.6 3,866,223 - +0.1 3,866,223 - -1.5 3,866,223 - -0.0 3,866,281 + -2.0 3,866,281 + +0.8 3,866,281 + -0.7 3,866,281 + -1.0 3,866,281 + +0.3 3,866,281 + +0.4 3,866,281 + -0.9 3,866,281 + +0.4 3,866,281 + +0.2 3,866,281 + -0.3 3,866,282 - -1.3 3,866,282 - -0.0 3,866,282 - -0.7 3,866,282 - -0.8 3,866,282 - +0.8 3,866,282 - -0.2 3,866,282 - +0.4 3,866,282 - -1.6 3,866,282 - +0.3
Or see this region's nucleotide sequence