Strain Fitness in Pantoea sp. MT58 around IAI47_12170

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,575,348	-				-0.2
2,575,348	-				+0.1
2,575,348	-				+2.7
2,575,430	+		IAI47_12160	0.17	+0.4
2,575,430	+		IAI47_12160	0.17	+0.2
2,575,431	-		IAI47_12160	0.18	+1.1
2,575,431	-		IAI47_12160	0.18	+1.4
2,575,496	+		IAI47_12160	0.34	+0.6
2,575,497	-		IAI47_12160	0.34	+1.2
2,575,532	+		IAI47_12160	0.42	+1.0
2,575,533	-		IAI47_12160	0.43	-0.2
2,575,533	-		IAI47_12160	0.43	+1.2
2,575,632	+		IAI47_12160	0.67	-0.5
2,575,632	+		IAI47_12160	0.67	+0.1
2,575,633	-		IAI47_12160	0.67	+1.3
2,575,633	-		IAI47_12160	0.67	-0.1
2,575,640	+		IAI47_12160	0.69	-0.7
2,575,640	+		IAI47_12160	0.69	+1.4
2,575,640	+		IAI47_12160	0.69	-2.0
2,575,640	+		IAI47_12160	0.69	+1.3
2,575,640	+		IAI47_12160	0.69	-1.2
2,575,640	+		IAI47_12160	0.69	-0.5
2,575,640	+		IAI47_12160	0.69	+0.6
2,575,641	-		IAI47_12160	0.69	+1.5
2,575,641	-		IAI47_12160	0.69	+0.1
2,575,641	-		IAI47_12160	0.69	+1.9
2,575,641	-		IAI47_12160	0.69	+1.8
2,575,641	-		IAI47_12160	0.69	+1.2
2,575,641	-		IAI47_12160	0.69	+1.6
2,575,641	-		IAI47_12160	0.69	+0.9
2,575,641	-		IAI47_12160	0.69	+1.5
2,575,641	-		IAI47_12160	0.69	+1.1
2,575,647	+		IAI47_12160	0.71	+0.5
2,575,647	+		IAI47_12160	0.71	+0.1
2,575,687	-		IAI47_12160	0.81	+2.0
2,575,702	+		IAI47_12160	0.84	+0.7
2,575,702	+		IAI47_12160	0.84	-1.4
2,575,703	-		IAI47_12160	0.85	+1.0
2,575,703	-		IAI47_12160	0.85	+0.5
2,575,749	+				+0.4
2,575,750	-				+2.0
2,575,768	+				-0.2
2,575,768	+				+0.6
2,575,768	+				+0.2
2,575,768	+				+1.4
2,575,768	+				+1.5
2,575,768	+				+0.8
2,575,768	+				-0.9
2,575,768	+				+0.9
2,575,768	+				-1.0
2,575,769	-				+1.5
2,575,769	-				+0.5
2,575,769	-				+1.2
2,575,779	+				+1.0
2,575,779	+				-0.2
2,575,779	+				-0.2
2,575,780	-				+1.3
2,575,780	-				+0.3
2,575,780	-				+0.5
2,575,834	+		IAI47_12165	0.16	+1.0
2,575,863	-		IAI47_12165	0.23	+1.6
2,575,877	+		IAI47_12165	0.27	-0.3
2,575,877	+		IAI47_12165	0.27	+1.0
2,575,878	-		IAI47_12165	0.27	+1.5
2,575,878	-		IAI47_12165	0.27	+1.4
2,575,878	-		IAI47_12165	0.27	+0.8
2,575,878	-		IAI47_12165	0.27	+0.5
2,575,881	+		IAI47_12165	0.28	-1.0
2,575,881	+		IAI47_12165	0.28	-0.6
2,575,881	+		IAI47_12165	0.28	-1.8
2,575,881	+		IAI47_12165	0.28	+0.3
2,575,881	+		IAI47_12165	0.28	+0.1
2,575,882	-		IAI47_12165	0.28	+1.0
2,575,882	-		IAI47_12165	0.28	+1.9
2,575,882	-		IAI47_12165	0.28	+1.2
2,575,882	-		IAI47_12165	0.28	+0.1
2,575,882	-		IAI47_12165	0.28	+1.9
2,575,882	-		IAI47_12165	0.28	+0.7
2,575,882	-		IAI47_12165	0.28	+1.6
2,575,928	+		IAI47_12165	0.39	+1.6
2,575,928	+		IAI47_12165	0.39	+1.0
2,575,929	-		IAI47_12165	0.39	+2.2
2,575,929	-		IAI47_12165	0.39	+1.2
2,576,068	+		IAI47_12165	0.73	+0.7
2,576,093	+		IAI47_12165	0.79	+0.3
2,576,093	+		IAI47_12165	0.79	+1.1
2,576,094	-		IAI47_12165	0.79	+2.3
2,576,094	-		IAI47_12165	0.79	-0.4
2,576,094	-		IAI47_12165	0.79	+1.3
2,576,193	+				+0.8
2,576,194	-				-0.0
2,576,217	+				+0.0
2,576,217	+				-2.2
2,576,217	+				+0.9
2,576,218	-				+0.8
2,576,249	+				+1.0
2,576,250	-				+0.6
2,576,257	+				+1.4
2,576,257	+				+1.4
2,576,257	+				+0.6
2,576,258	-				+1.0
2,576,258	-				+0.5
2,576,258	-				+1.5
2,576,268	+				+1.2
2,576,294	-				+0.2
2,576,300	+				+0.2
2,576,301	-				+0.1
2,576,301	-				+0.3
2,576,301	-				+0.1
2,576,301	-				+2.1
2,576,344	+				+1.3
2,576,344	+				+1.5
2,576,468	+		IAI47_12170	0.20	+2.0
2,576,553	+		IAI47_12170	0.33	+1.2
2,576,554	-		IAI47_12170	0.33	-0.1
2,576,554	-		IAI47_12170	0.33	+1.7
2,576,554	-		IAI47_12170	0.33	+1.4
2,576,590	+		IAI47_12170	0.39	+1.4
2,576,590	+		IAI47_12170	0.39	+2.1
2,576,590	+		IAI47_12170	0.39	+2.4
2,576,590	+		IAI47_12170	0.39	+1.7
2,576,590	+		IAI47_12170	0.39	+1.3
2,576,590	+		IAI47_12170	0.39	+0.3
2,576,591	-		IAI47_12170	0.39	+0.7
2,576,591	-		IAI47_12170	0.39	+0.8
2,576,591	-		IAI47_12170	0.39	+0.7
2,576,591	-		IAI47_12170	0.39	+0.4
2,576,591	-		IAI47_12170	0.39	+1.7
2,576,592	+		IAI47_12170	0.39	+0.9
2,576,592	+		IAI47_12170	0.39	+1.5
2,576,592	+		IAI47_12170	0.39	+1.0
2,576,592	+		IAI47_12170	0.39	+0.1
2,576,592	+		IAI47_12170	0.39	+1.4
2,576,593	-		IAI47_12170	0.39	-0.5
2,576,593	-		IAI47_12170	0.39	+0.5
2,576,593	-		IAI47_12170	0.39	+1.8
2,576,593	-		IAI47_12170	0.39	+0.0
2,576,600	+		IAI47_12170	0.40	+1.3
2,576,600	+				+1.1
2,576,600	+		IAI47_12170	0.40	+1.2
2,576,601	-		IAI47_12170	0.40	-1.2
2,576,601	-		IAI47_12170	0.40	-0.6
2,576,623	+		IAI47_12170	0.44	+3.3
2,576,623	+		IAI47_12170	0.44	+1.3
2,576,623	+		IAI47_12170	0.44	+1.4
2,576,623	+		IAI47_12170	0.44	+1.6
2,576,623	+		IAI47_12170	0.44	+0.7
2,576,623	+		IAI47_12170	0.44	+2.8
2,576,623	+		IAI47_12170	0.44	+0.4
2,576,624	-		IAI47_12170	0.44	-0.5
2,576,624	-		IAI47_12170	0.44	+1.0
2,576,624	-		IAI47_12170	0.44	+1.6
2,576,658	+		IAI47_12170	0.49	+1.6
2,576,658	+		IAI47_12170	0.49	+0.6
2,576,659	-		IAI47_12170	0.49	+0.2
2,576,821	-		IAI47_12170	0.74	+0.5
2,576,821	-		IAI47_12170	0.74	-0.5
2,576,929	-				+0.9
2,576,976	+				+2.1
2,576,977	-				-0.2
2,576,982	+				+1.1
2,576,982	+				-0.1
2,576,982	+				+1.0
2,576,982	+				+0.4
2,576,983	-				+0.8
2,576,983	-				+0.1
2,576,983	-				+0.4
2,576,983	-				+0.8
2,576,983	-				-1.9
2,576,984	+				+0.8
2,576,985	-				-0.3
2,576,985	-				+0.5
2,576,985	-				+0.4
2,576,992	+				+0.3
2,576,992	+				+0.2
2,576,992	+				-0.9
2,576,992	+				-0.1
2,576,993	-				-0.4
2,576,993	-				+1.9
2,576,993	-				-0.9
2,577,001	-				-0.5
2,577,001	-				-0.1
2,577,011	+				-0.2
2,577,011	+				+0.4
2,577,011	+				+0.1
2,577,012	-				-0.5
2,577,012	-				+0.6
2,577,025	-				+0.5
2,577,050	+				-0.2
2,577,050	+				+0.2
2,577,050	+				-0.2
2,577,051	-				+0.6
2,577,051	-				-0.2
2,577,051	-				-0.7
2,577,051	-				+0.6
2,577,053	+				+0.8
2,577,053	+				-1.4
2,577,053	+				-0.4
2,577,054	-				-0.4
2,577,054	-				-0.2
2,577,054	-				+1.8
2,577,085	+				+0.5
2,577,086	-				-0.6
2,577,086	-				+0.1
2,577,099	+				-1.2
2,577,100	-				-0.7
2,577,100	-				-0.2
2,577,144	-		IAI47_12175	0.14	-0.8
2,577,144	-		IAI47_12175	0.14	+0.9
2,577,285	+		IAI47_12175	0.60	-1.4
2,577,285	+		IAI47_12175	0.60	-0.1
2,577,285	+		IAI47_12175	0.60	+3.0
2,577,285	+		IAI47_12175	0.60	-0.4
2,577,285	+		IAI47_12175	0.60	+0.6
2,577,285	+		IAI47_12175	0.60	-0.2
2,577,286	-		IAI47_12175	0.60	+0.3
2,577,286	-		IAI47_12175	0.60	+1.6
2,577,289	-		IAI47_12175	0.61	+0.7
2,577,327	+		IAI47_12175	0.73	-1.2
2,577,392	-				-0.3
2,577,392	-				+1.2
2,577,392	-				+0.7
2,577,395	+				+0.4
2,577,396	-				-0.0
2,577,402	+				+0.1
2,577,403	-				-0.3
2,577,406	+				+0.4
2,577,406	+				+0.5
2,577,406	+				+1.0
2,577,406	+				+1.3
2,577,406	+				+1.8
2,577,407	-				-0.2
2,577,407	-				+0.0
2,577,407	-				+1.1
2,577,419	+				+1.8
2,577,419	+				+0.8
2,577,420	-				-0.1
2,577,436	+				+0.7
2,577,436	+				+1.1
2,577,436	+				+2.1
2,577,436	+				+0.5
2,577,436	+				+2.4
2,577,436	+				+1.2
2,577,436	+				-1.3
2,577,436	+				+0.6
2,577,437	-				-0.3
2,577,437	-				+0.2
2,577,437	-				+0.6
2,577,437	-				-1.5
2,577,440	+				+1.1
2,577,440	+				+0.7
2,577,440	+				+0.6
2,577,440	+				+0.4
2,577,440	+				-0.8
2,577,441	-				-1.1
2,577,441	-				+0.5
2,577,441	-				+2.2
2,577,441	-				+1.1
2,577,441	-				+0.7
2,577,515	+		IAI47_12180	0.23	+1.1
2,577,516	-		IAI47_12180	0.24	+0.6
2,577,516	-		IAI47_12180	0.24	+1.3
2,577,536	+		IAI47_12180	0.28	+0.9
2,577,537	-		IAI47_12180	0.28	+0.6
2,577,548	+		IAI47_12180	0.31	+1.2
2,577,548	+		IAI47_12180	0.31	+1.6
2,577,549	-		IAI47_12180	0.31	+1.4
2,577,567	-		IAI47_12180	0.35	-0.6
2,577,576	+		IAI47_12180	0.38	+0.9
2,577,577	-		IAI47_12180	0.38	+0.8
2,577,577	-		IAI47_12180	0.38	+0.8
2,577,577	-		IAI47_12180	0.38	+0.5
2,577,577	-		IAI47_12180	0.38	+0.1
2,577,630	+		IAI47_12180	0.50	+1.1
2,577,630	+		IAI47_12180	0.50	+1.4
2,577,631	-		IAI47_12180	0.50	+1.6
2,577,665	+		IAI47_12180	0.58	+0.6
2,577,666	-		IAI47_12180	0.58	-0.2
2,577,741	+		IAI47_12180	0.76	+1.6
2,577,742	-		IAI47_12180	0.76	+1.6
2,577,792	+		IAI47_12180	0.88	+2.4
2,577,792	+		IAI47_12180	0.88	+1.1
2,577,812	+				+0.5
2,577,812	+				+0.5
2,577,813	-				+0.3
2,577,829	+				+0.6
2,577,856	-				-0.5
2,577,860	+				+1.5
2,577,860	+				-0.2
2,577,890	+				-0.2
2,577,902	-				+1.2
2,577,910	+				-0.7
2,577,939	+				-0.2
2,577,939	+				+0.1
2,577,940	-				+0.1
2,577,940	-				+2.3