Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1808

Experiment: MoLS4 with L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnadC and nadA overlap by 4 nucleotidesnadA and nadB are separated by 12 nucleotides DVU1807: nadC - nicotinate-nucleotide pyrophosphorylase (TIGR), at 1,871,670 to 1,872,557 nadC DVU1808: nadA - quinolinate synthetase complex, subunit A (TIGR), at 1,872,554 to 1,873,630 nadA DVU1809: nadB - L-aspartate oxidase (TIGR), at 1,873,643 to 1,875,229 nadB Position (kb) 1872 1873 1874Strain fitness (log2 ratio) -1 0 1at 1871.586 kb on + strandat 1871.588 kb on - strandat 1871.604 kb on + strandat 1871.646 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Lysine (N)
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1,871,586 + +0.2
1,871,588 - -0.3
1,871,604 + +0.0
1,871,646 - -0.0

Or see this region's nucleotide sequence