Experiment: Succinate (C)_noKan
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt 11723590 and 11438836 are separated by 0 nucleotides 11438836 and 11581199 overlap by 29 nucleotides 11581199 and 11723591 overlap by 29 nucleotides 11723591 and 11438837 are separated by 0 nucleotides 11438837 and 11581200 overlap by 32 nucleotides 11581200 and 11723592 overlap by 32 nucleotides 11723592 and 11438838 are separated by 0 nucleotides 11438838 and 11581201 overlap by 29 nucleotides 11581201 and 11723593 overlap by 29 nucleotides 11723593 and 11438839 are separated by 0 nucleotides 11438839 and 11581202 overlap by 32 nucleotides 11581202 and 11723594 overlap by 32 nucleotides 11723594 and 11438840 are separated by 0 nucleotides 11438840 and 11581203 overlap by 29 nucleotides 11581203 and 11723595 overlap by 29 nucleotides 11723595 and 11438841 are separated by 0 nucleotides 11438841 and 11581204 overlap by 32 nucleotides 11581204 and 11723596 overlap by 32 nucleotides 11723596 and 11438842 are separated by 0 nucleotides 11438842 and 11581205 overlap by 29 nucleotides 11581205 and 11723597 overlap by 29 nucleotides 11723597 and 11438843 are separated by 0 nucleotides 11438843 and 11581206 overlap by 32 nucleotides 11581206 and 11723598 overlap by 32 nucleotides 11723598 and 11438844 are separated by 0 nucleotides 11438844 and 11581207 overlap by 29 nucleotides 11581207 and 11723599 overlap by 29 nucleotides 11723599 and 11438845 are separated by 0 nucleotides 11438845 and 11581208 overlap by 32 nucleotides 11581208 and 11723600 overlap by 32 nucleotides 11723600 and 11438846 are separated by 0 nucleotides 11438846 and 11581209 overlap by 29 nucleotides 11581209 and 11723601 overlap by 29 nucleotides 11723601 and 11438847 are separated by 0 nucleotides 11438847 and 11581210 overlap by 32 nucleotides 11581210 and 11723602 overlap by 32 nucleotides 11723602 and 11438848 are separated by 0 nucleotides 11438848 and 11581211 overlap by 29 nucleotides 11581211 and 11723603 overlap by 29 nucleotides 11723603 and 11438849 are separated by 0 nucleotides 11438849 and 11581212 overlap by 32 nucleotides 11581212 and 11723604 overlap by 32 nucleotides 11723604 and 11438850 are separated by 0 nucleotides 11438850 and 11581213 overlap by 29 nucleotides 11581213 and 11723605 overlap by 29 nucleotides 11723605 and 11438851 are separated by 0 nucleotides 11438851 and 11581214 overlap by 32 nucleotides 11581214 and 11723606 overlap by 32 nucleotides 11723606 and 11438852 are separated by 0 nucleotides 11438852 and 11581215 overlap by 29 nucleotides 11581215 and 11723607 overlap by 29 nucleotides 11723607 and 11438853 are separated by 0 nucleotides 11438853 and 11581216 overlap by 32 nucleotides 11581216 and 11723608 overlap by 32 nucleotides 11723608 and 11438854 are separated by 0 nucleotides 11438854 and 11581217 overlap by 29 nucleotides 11581217 and 11723609 overlap by 29 nucleotides 11723609 and 11438855 are separated by 0 nucleotides 11438855 and 11581218 overlap by 32 nucleotides 11581218 and 11723610 overlap by 32 nucleotides 11723610 and 11438856 are separated by 0 nucleotides 11438856 and 11581219 overlap by 29 nucleotides 11581219 and 11723611 overlap by 29 nucleotides 11723611 and 11438857 are separated by 0 nucleotides 11438857 and 11581220 overlap by 32 nucleotides 11581220 and 11723612 overlap by 32 nucleotides 11723612 and 11438858 are separated by 0 nucleotides 11438858 and 11581221 overlap by 29 nucleotides 11581221 and 11723613 overlap by 29 nucleotides 11723613 and 11438859 are separated by 0 nucleotides 11438859 and 11581222 overlap by 32 nucleotides 11581222 and 11723614 overlap by 32 nucleotides 11723614 and 11438860 are separated by 0 nucleotides 11438860 and 11581223 overlap by 29 nucleotides 11581223 and 11723615 overlap by 29 nucleotides 11723615 and 11438861 are separated by 0 nucleotides 11438861 and 11581224 overlap by 32 nucleotides 11581224 and 11723616 overlap by 32 nucleotides 11723616 and 11438862 are separated by 0 nucleotides 11438862 and 11581225 overlap by 29 nucleotides 11581225 and 11723617 overlap by 29 nucleotides 11723617 and 11438863 are separated by 0 nucleotides 11438863 and 11581226 overlap by 32 nucleotides 11581226 and 11723618 overlap by 32 nucleotides 11723618 and 11438864 are separated by 0 nucleotides 11438864 and 11581227 overlap by 29 nucleotides 11581227 and 11723619 overlap by 29 nucleotides 11723619 and 11438865 are separated by 0 nucleotides 11438865 and 11581228 overlap by 32 nucleotides 11581228 and 11723620 overlap by 32 nucleotides 11723620 and 11438866 are separated by 0 nucleotides 11438866 and 11581229 overlap by 29 nucleotides 11581229 and 11723621 overlap by 29 nucleotides 11723621 and 11438867 are separated by 0 nucleotides 11438867 and 11581230 overlap by 32 nucleotides 11581230 and 11723622 overlap by 32 nucleotides 11723622 and 11438868 are separated by 0 nucleotides 11438868 and 11581231 overlap by 29 nucleotides 11581231 and 11723623 overlap by 29 nucleotides 11723623 and Rru_A1343 are separated by 284 nucleotides
11438835 - no description, at 1,580,925 to 1,580,956
11438835
11581198 - no description, at 1,580,925 to 1,580,956
11581198
11723590 - no description, at 1,580,925 to 1,580,956
11723590
11438836 - no description, at 1,580,957 to 1,580,985
11438836
11581199 - no description, at 1,580,957 to 1,580,985
11581199
11723591 - no description, at 1,580,957 to 1,580,985
11723591
11438837 - no description, at 1,580,986 to 1,581,017
11438837
11581200 - no description, at 1,580,986 to 1,581,017
11581200
11723592 - no description, at 1,580,986 to 1,581,017
11723592
11438838 - no description, at 1,581,018 to 1,581,046
11438838
11581201 - no description, at 1,581,018 to 1,581,046
11581201
11723593 - no description, at 1,581,018 to 1,581,046
11723593
11438839 - no description, at 1,581,047 to 1,581,078
11438839
11581202 - no description, at 1,581,047 to 1,581,078
11581202
11723594 - no description, at 1,581,047 to 1,581,078
11723594
11438840 - no description, at 1,581,079 to 1,581,107
11438840
11581203 - no description, at 1,581,079 to 1,581,107
11581203
11723595 - no description, at 1,581,079 to 1,581,107
11723595
11438841 - no description, at 1,581,108 to 1,581,139
11438841
11581204 - no description, at 1,581,108 to 1,581,139
11581204
11723596 - no description, at 1,581,108 to 1,581,139
11723596
11438842 - no description, at 1,581,140 to 1,581,168
11438842
11581205 - no description, at 1,581,140 to 1,581,168
11581205
11723597 - no description, at 1,581,140 to 1,581,168
11723597
11438843 - no description, at 1,581,169 to 1,581,200
11438843
11581206 - no description, at 1,581,169 to 1,581,200
11581206
11723598 - no description, at 1,581,169 to 1,581,200
11723598
11438844 - no description, at 1,581,201 to 1,581,229
11438844
11581207 - no description, at 1,581,201 to 1,581,229
11581207
11723599 - no description, at 1,581,201 to 1,581,229
11723599
11438845 - no description, at 1,581,230 to 1,581,261
11438845
11581208 - no description, at 1,581,230 to 1,581,261
11581208
11723600 - no description, at 1,581,230 to 1,581,261
11723600
11438846 - no description, at 1,581,262 to 1,581,290
11438846
11581209 - no description, at 1,581,262 to 1,581,290
11581209
11723601 - no description, at 1,581,262 to 1,581,290
11723601
11438847 - no description, at 1,581,291 to 1,581,322
11438847
11581210 - no description, at 1,581,291 to 1,581,322
11581210
11723602 - no description, at 1,581,291 to 1,581,322
11723602
11438848 - no description, at 1,581,323 to 1,581,351
11438848
11581211 - no description, at 1,581,323 to 1,581,351
11581211
11723603 - no description, at 1,581,323 to 1,581,351
11723603
11438849 - no description, at 1,581,352 to 1,581,383
11438849
11581212 - no description, at 1,581,352 to 1,581,383
11581212
11723604 - no description, at 1,581,352 to 1,581,383
11723604
11438850 - no description, at 1,581,384 to 1,581,412
11438850
11581213 - no description, at 1,581,384 to 1,581,412
11581213
11723605 - no description, at 1,581,384 to 1,581,412
11723605
11438851 - no description, at 1,581,413 to 1,581,444
11438851
11581214 - no description, at 1,581,413 to 1,581,444
11581214
11723606 - no description, at 1,581,413 to 1,581,444
11723606
11438852 - no description, at 1,581,445 to 1,581,473
11438852
11581215 - no description, at 1,581,445 to 1,581,473
11581215
11723607 - no description, at 1,581,445 to 1,581,473
11723607
11438853 - no description, at 1,581,474 to 1,581,505
11438853
11581216 - no description, at 1,581,474 to 1,581,505
11581216
11723608 - no description, at 1,581,474 to 1,581,505
11723608
11438854 - no description, at 1,581,506 to 1,581,534
11438854
11581217 - no description, at 1,581,506 to 1,581,534
11581217
11723609 - no description, at 1,581,506 to 1,581,534
11723609
11438855 - no description, at 1,581,535 to 1,581,566
11438855
11581218 - no description, at 1,581,535 to 1,581,566
11581218
11723610 - no description, at 1,581,535 to 1,581,566
11723610
11438856 - no description, at 1,581,567 to 1,581,595
11438856
11581219 - no description, at 1,581,567 to 1,581,595
11581219
11723611 - no description, at 1,581,567 to 1,581,595
11723611
11438857 - no description, at 1,581,596 to 1,581,627
11438857
11581220 - no description, at 1,581,596 to 1,581,627
11581220
11723612 - no description, at 1,581,596 to 1,581,627
11723612
11438858 - no description, at 1,581,628 to 1,581,656
11438858
11581221 - no description, at 1,581,628 to 1,581,656
11581221
11723613 - no description, at 1,581,628 to 1,581,656
11723613
11438859 - no description, at 1,581,657 to 1,581,688
11438859
11581222 - no description, at 1,581,657 to 1,581,688
11581222
11723614 - no description, at 1,581,657 to 1,581,688
11723614
11438860 - no description, at 1,581,689 to 1,581,717
11438860
11581223 - no description, at 1,581,689 to 1,581,717
11581223
11723615 - no description, at 1,581,689 to 1,581,717
11723615
11438861 - no description, at 1,581,718 to 1,581,749
11438861
11581224 - no description, at 1,581,718 to 1,581,749
11581224
11723616 - no description, at 1,581,718 to 1,581,749
11723616
11438862 - no description, at 1,581,750 to 1,581,778
11438862
11581225 - no description, at 1,581,750 to 1,581,778
11581225
11723617 - no description, at 1,581,750 to 1,581,778
11723617
11438863 - no description, at 1,581,779 to 1,581,810
11438863
11581226 - no description, at 1,581,779 to 1,581,810
11581226
11723618 - no description, at 1,581,779 to 1,581,810
11723618
11438864 - no description, at 1,581,811 to 1,581,839
11438864
11581227 - no description, at 1,581,811 to 1,581,839
11581227
11723619 - no description, at 1,581,811 to 1,581,839
11723619
11438865 - no description, at 1,581,840 to 1,581,871
11438865
11581228 - no description, at 1,581,840 to 1,581,871
11581228
11723620 - no description, at 1,581,840 to 1,581,871
11723620
11438866 - no description, at 1,581,872 to 1,581,900
11438866
11581229 - no description, at 1,581,872 to 1,581,900
11581229
11723621 - no description, at 1,581,872 to 1,581,900
11723621
11438867 - no description, at 1,581,901 to 1,581,932
11438867
11581230 - no description, at 1,581,901 to 1,581,932
11581230
11723622 - no description, at 1,581,901 to 1,581,932
11723622
11438868 - no description, at 1,581,933 to 1,581,961
11438868
11581231 - no description, at 1,581,933 to 1,581,961
11581231
11723623 - no description, at 1,581,933 to 1,581,961
11723623
Rru_A1343: Rru_A1343 - hypothetical protein (NCBI), at 1,582,246 to 1,583,757
_A1343
Position (kb)
1581
1582 Strain fitness (log2 ratio)
-1
0
1 at 1581.192 kb on + strand at 1581.192 kb on + strand at 1581.192 kb on + strand at 1581.192 kb on + strand at 1581.192 kb on + strand at 1581.193 kb on - strand at 1581.193 kb on - strand at 1581.193 kb on - strand at 1581.193 kb on - strand at 1581.193 kb on - strand at 1581.193 kb on - strand at 1581.259 kb on + strand at 1581.260 kb on - strand at 1581.260 kb on - strand at 1581.357 kb on + strand at 1581.357 kb on + strand at 1581.357 kb on + strand at 1581.357 kb on + strand at 1581.357 kb on + strand at 1581.357 kb on + strand at 1581.358 kb on - strand at 1581.436 kb on + strand at 1581.623 kb on + strand at 1581.623 kb on + strand at 1581.624 kb on - strand at 1581.624 kb on - strand at 1581.624 kb on - strand at 1581.624 kb on - strand at 1581.624 kb on - strand at 1581.624 kb on - strand at 1581.657 kb on + strand at 1581.657 kb on + strand at 1581.657 kb on + strand at 1581.657 kb on + strand at 1581.657 kb on + strand at 1581.657 kb on + strand at 1581.658 kb on - strand at 1581.658 kb on - strand at 1581.658 kb on - strand at 1581.658 kb on - strand at 1582.056 kb on - strand at 1582.070 kb on + strand at 1582.071 kb on - strand at 1582.217 kb on + strand at 1582.405 kb on - strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.416 kb on + strand, within Rru_A1343 at 1582.417 kb on - strand, within Rru_A1343 at 1582.417 kb on - strand, within Rru_A1343 at 1582.417 kb on - strand, within Rru_A1343 at 1582.557 kb on - strand, within Rru_A1343 at 1582.557 kb on - strand, within Rru_A1343 at 1582.557 kb on - strand, within Rru_A1343 at 1582.557 kb on - strand, within Rru_A1343 at 1582.559 kb on + strand, within Rru_A1343 at 1582.559 kb on + strand, within Rru_A1343 at 1582.892 kb on + strand, within Rru_A1343 at 1582.892 kb on + strand, within Rru_A1343 at 1582.892 kb on + strand, within Rru_A1343 at 1582.893 kb on - strand, within Rru_A1343
Per-strain Table
Position Strand Gene LocusTag Fraction Succinate (C)_noKan remove 1,581,192 + -0.4 1,581,192 + +0.6 1,581,192 + -0.2 1,581,192 + +0.3 1,581,192 + -0.1 1,581,193 - +0.0 1,581,193 - -0.0 1,581,193 - +0.1 1,581,193 - -0.9 1,581,193 - +0.2 1,581,193 - -0.1 1,581,259 + -0.2 1,581,260 - -0.1 1,581,260 - +0.2 1,581,357 + +0.3 1,581,357 + +0.1 1,581,357 + +0.1 1,581,357 + -0.1 1,581,357 + +0.2 1,581,357 + +1.5 1,581,358 - +0.5 1,581,436 + -0.7 1,581,623 + +0.2 1,581,623 + +0.0 1,581,624 - -0.3 1,581,624 - +0.0 1,581,624 - +0.3 1,581,624 - -0.0 1,581,624 - -0.4 1,581,624 - -0.0 1,581,657 + -0.1 1,581,657 + +0.5 1,581,657 + +0.0 1,581,657 + +0.0 1,581,657 + -0.1 1,581,657 + -0.6 1,581,658 - +0.3 1,581,658 - -0.1 1,581,658 - +0.3 1,581,658 - +0.3 1,582,056 - +0.1 1,582,070 + -0.2 1,582,071 - -0.1 1,582,217 + -0.2 1,582,405 - Rru_A1343 0.11 -0.1 1,582,416 + Rru_A1343 0.11 -0.7 1,582,416 + Rru_A1343 0.11 -0.4 1,582,416 + Rru_A1343 0.11 -0.1 1,582,416 + Rru_A1343 0.11 +0.2 1,582,416 + Rru_A1343 0.11 +0.2 1,582,416 + Rru_A1343 0.11 +0.8 1,582,416 + Rru_A1343 0.11 -0.7 1,582,417 - Rru_A1343 0.11 -0.2 1,582,417 - Rru_A1343 0.11 +1.5 1,582,417 - Rru_A1343 0.11 -0.0 1,582,557 - Rru_A1343 0.21 -0.1 1,582,557 - Rru_A1343 0.21 +0.4 1,582,557 - Rru_A1343 0.21 +0.3 1,582,557 - Rru_A1343 0.21 +0.5 1,582,559 + Rru_A1343 0.21 +0.2 1,582,559 + Rru_A1343 0.21 -0.2 1,582,892 + Rru_A1343 0.43 -0.1 1,582,892 + Rru_A1343 0.43 -0.5 1,582,892 + Rru_A1343 0.43 -0.4 1,582,893 - Rru_A1343 0.43 +0.1
Or see this region's nucleotide sequence