Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34230

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
3,586,220	-		PGA1_c34220	0.23	+0.2
3,586,221	-		PGA1_c34220	0.23	+0.0
3,586,221	-		PGA1_c34220	0.23	+0.5
3,586,236	-		PGA1_c34220	0.24	-0.6
3,586,315	+		PGA1_c34220	0.31	+0.6
3,586,315	-		PGA1_c34220	0.31	-0.6
3,586,323	-		PGA1_c34220	0.31	-1.2
3,586,360	-		PGA1_c34220	0.35	-0.2
3,586,360	-		PGA1_c34220	0.35	-0.6
3,586,362	+		PGA1_c34220	0.35	+1.0
3,586,362	+		PGA1_c34220	0.35	+0.2
3,586,381	-		PGA1_c34220	0.36	-0.6
3,586,388	+		PGA1_c34220	0.37	-0.3
3,586,388	+		PGA1_c34220	0.37	-0.1
3,586,401	-		PGA1_c34220	0.38	-0.4
3,586,407	-		PGA1_c34220	0.39	+0.3
3,586,409	+		PGA1_c34220	0.39	+0.1
3,586,417	-		PGA1_c34220	0.40	-0.6
3,586,480	+		PGA1_c34220	0.45	-0.0
3,586,485	+		PGA1_c34220	0.45	+1.7
3,586,486	+		PGA1_c34220	0.45	-0.0
3,586,491	+		PGA1_c34220	0.46	+0.1
3,586,494	-		PGA1_c34220	0.46	-2.4
3,586,501	-		PGA1_c34220	0.47	+0.1
3,586,545	-		PGA1_c34220	0.51	+1.0
3,586,591	+		PGA1_c34220	0.54	-0.3
3,586,599	-		PGA1_c34220	0.55	+0.0
3,586,599	-		PGA1_c34220	0.55	-0.1
3,586,658	+		PGA1_c34220	0.60	-1.3
3,586,666	-		PGA1_c34220	0.61	-0.2
3,586,702	+		PGA1_c34220	0.64	-0.2
3,586,710	-		PGA1_c34220	0.65	-2.3
3,586,782	+		PGA1_c34220	0.71	+0.2
3,586,783	-		PGA1_c34220	0.71	-0.4
3,586,816	-		PGA1_c34220	0.74	-0.3
3,586,851	+		PGA1_c34220	0.77	+0.4
3,586,851	+		PGA1_c34220	0.77	+0.3
3,586,859	-		PGA1_c34220	0.77	-0.0
3,586,862	+		PGA1_c34220	0.78	-0.0
3,586,886	-		PGA1_c34220	0.80	-1.1
3,586,926	-		PGA1_c34220	0.83	-0.8
3,586,937	+		PGA1_c34220	0.84	+0.4
3,587,013	-				+0.2
3,587,017	+				-0.6
3,587,052	-				-1.6
3,587,052	-				-0.9
3,587,052	-				-0.1
3,587,098	+				+0.3
3,587,108	+				+0.2
3,587,116	-				-2.5
3,587,116	-				-1.5
3,587,130	+				-0.3
3,587,139	-				+0.2
3,587,163	+				-1.0
3,587,163	+				+0.4
3,587,264	-				+0.4
3,587,317	+		PGA1_c34230	0.11	+0.4
3,587,340	+		PGA1_c34230	0.14	+0.2
3,587,340	+		PGA1_c34230	0.14	-0.2
3,587,340	+		PGA1_c34230	0.14	-0.6
3,587,340	+		PGA1_c34230	0.14	+0.4
3,587,340	+		PGA1_c34230	0.14	+0.5
3,587,348	-		PGA1_c34230	0.15	-0.5
3,587,348	-		PGA1_c34230	0.15	-0.1
3,587,348	-		PGA1_c34230	0.15	+0.9
3,587,395	-		PGA1_c34230	0.20	+0.3
3,587,418	-		PGA1_c34230	0.22	+0.1
3,587,424	+		PGA1_c34230	0.23	-0.1
3,587,427	-		PGA1_c34230	0.23	+0.5
3,587,432	-		PGA1_c34230	0.24	+1.1
3,587,432	-		PGA1_c34230	0.24	+1.3
3,587,432	-		PGA1_c34230	0.24	-0.6
3,587,462	+		PGA1_c34230	0.27	+0.6
3,587,475	+		PGA1_c34230	0.28	+0.1
3,587,483	-		PGA1_c34230	0.29	+1.4
3,587,485	+		PGA1_c34230	0.29	+0.1
3,587,531	-		PGA1_c34230	0.34	+1.4
3,587,581	-		PGA1_c34230	0.39	+1.0
3,587,663	-		PGA1_c34230	0.48	+0.1
3,587,828	-				+1.7
3,587,835	-		PGA1_c34230	0.66	-0.3
3,587,842	+		PGA1_c34230	0.67	-0.3
3,587,850	-		PGA1_c34230	0.68	+0.2
3,587,851	+		PGA1_c34230	0.68	-0.1
3,587,915	-		PGA1_c34230	0.75	-0.2
3,587,927	+		PGA1_c34230	0.76	+0.5
3,588,063	+				-0.4
3,588,063	-				-0.1
3,588,078	+				-0.4
3,588,093	-				-0.6
3,588,093	-				-0.2
3,588,180	-				+0.4
3,588,222	-				+0.5
3,588,225	+				+0.5
3,588,233	-				+0.8
3,588,233	-				+0.1
3,588,287	+				+0.9
3,588,373	+				-0.7
3,588,408	+				+0.8
3,588,471	-		PGA1_c34240	0.11	-0.1
3,588,532	+		PGA1_c34240	0.15	-0.0
3,588,562	+		PGA1_c34240	0.16	-1.9
3,588,570	-		PGA1_c34240	0.17	-0.3
3,588,587	-		PGA1_c34240	0.18	+0.2
3,588,761	-		PGA1_c34240	0.27	+0.0
3,588,767	+		PGA1_c34240	0.28	+0.1
3,588,777	+		PGA1_c34240	0.28	+0.5
3,588,778	+		PGA1_c34240	0.28	-0.0
3,588,788	+		PGA1_c34240	0.29	-1.1
3,588,788	+		PGA1_c34240	0.29	+0.6
3,588,796	-		PGA1_c34240	0.29	+0.2
3,588,796	-		PGA1_c34240	0.29	+0.1
3,588,796	-		PGA1_c34240	0.29	-1.2
3,588,912	-		PGA1_c34240	0.36	+0.0
3,588,914	+		PGA1_c34240	0.36	-0.3
3,588,944	+		PGA1_c34240	0.37	+0.2
3,589,048	-		PGA1_c34240	0.43	+0.6
3,589,057	-		PGA1_c34240	0.44	-1.5
3,589,071	-		PGA1_c34240	0.44	-0.3
3,589,099	-		PGA1_c34240	0.46	+0.7
3,589,099	-		PGA1_c34240	0.46	+0.2
3,589,114	-		PGA1_c34240	0.47	+0.1
3,589,122	-		PGA1_c34240	0.47	+0.2
3,589,126	-		PGA1_c34240	0.47	-0.2
3,589,128	+		PGA1_c34240	0.48	-0.1
3,589,144	-		PGA1_c34240	0.48	-0.7