Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27290

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,843,150	+		PGA1_c27280	0.49	-0.4
2,843,200	-		PGA1_c27280	0.51	-0.4
2,843,284	+		PGA1_c27280	0.56	-0.4
2,843,326	-		PGA1_c27280	0.58	-0.9
2,843,335	-		PGA1_c27280	0.59	+0.4
2,843,396	+		PGA1_c27280	0.62	-0.3
2,843,445	+		PGA1_c27280	0.64	+0.7
2,843,462	-		PGA1_c27280	0.65	+0.5
2,843,473	-		PGA1_c27280	0.66	-1.9
2,843,582	-		PGA1_c27280	0.72	+0.2
2,843,592	-		PGA1_c27280	0.72	+1.1
2,843,623	+		PGA1_c27280	0.74	-0.4
2,843,704	+		PGA1_c27280	0.78	-0.3
2,843,707	-		PGA1_c27280	0.78	+0.2
2,843,707	-		PGA1_c27280	0.78	+0.0
2,843,712	+		PGA1_c27280	0.79	+0.7
2,843,712	-		PGA1_c27280	0.79	-1.1
2,843,712	-		PGA1_c27280	0.79	-0.5
2,843,712	-		PGA1_c27280	0.79	+0.6
2,843,712	-		PGA1_c27280	0.79	+0.1
2,843,712	-		PGA1_c27280	0.79	+0.3
2,843,717	-		PGA1_c27280	0.79	+1.1
2,843,719	+		PGA1_c27280	0.79	+0.2
2,843,727	-		PGA1_c27280	0.79	+0.2
2,843,750	-		PGA1_c27280	0.81	-1.1
2,843,750	-		PGA1_c27280	0.81	-0.8
2,843,750	-		PGA1_c27280	0.81	+0.2
2,843,785	+		PGA1_c27280	0.82	+0.6
2,843,793	-		PGA1_c27280	0.83	+1.5
2,843,872	+		PGA1_c27280	0.87	+0.7
2,843,900	+		PGA1_c27280	0.89	-1.3
2,843,928	-				-1.0
2,843,993	+				-0.3
2,844,017	+				+0.4
2,844,041	+				-0.3
2,844,049	+				-0.4
2,844,061	-				+0.8
2,844,066	-				+0.7
2,844,068	-				+0.5
2,844,071	-				+0.6
2,844,093	+				-1.6
2,844,121	-				-0.1
2,844,167	-		PGA1_c27290	0.13	+0.6
2,844,249	-		PGA1_c27290	0.32	-0.3
2,844,327	-		PGA1_c27290	0.50	+0.8
2,844,397	+		PGA1_c27290	0.66	+0.7
2,844,397	+		PGA1_c27290	0.66	-0.0
2,844,397	+		PGA1_c27290	0.66	+0.5
2,844,405	-		PGA1_c27290	0.68	+1.6
2,844,439	+		PGA1_c27290	0.76	-0.2
2,844,469	+		PGA1_c27290	0.83	-0.1
2,844,477	-		PGA1_c27290	0.85	+0.2
2,844,492	-		PGA1_c27290	0.88	+0.3
2,844,492	-		PGA1_c27290	0.88	+0.6
2,844,571	-				-0.9
2,844,652	+				+0.2
2,844,655	-				-0.5
2,844,699	+				-0.1
2,844,717	-				+0.1
2,844,725	-				+0.8
2,844,758	+				+0.7
2,844,834	-				-0.4
2,844,860	+		PGA1_c27300	0.12	+2.1
2,844,897	-		PGA1_c27300	0.16	-1.0
2,844,926	-		PGA1_c27300	0.19	+0.4
2,844,949	-		PGA1_c27300	0.22	-0.4
2,844,951	+		PGA1_c27300	0.22	+0.4
2,844,951	+		PGA1_c27300	0.22	-0.3
2,844,957	-		PGA1_c27300	0.23	-0.3
2,844,959	+		PGA1_c27300	0.23	+0.4
2,844,959	+		PGA1_c27300	0.23	-1.2
2,844,959	+		PGA1_c27300	0.23	+0.2
2,844,965	-		PGA1_c27300	0.24	-0.0
2,844,967	-		PGA1_c27300	0.24	+0.5
2,844,967	-		PGA1_c27300	0.24	-0.0
2,844,967	-		PGA1_c27300	0.24	-2.0
2,844,967	-		PGA1_c27300	0.24	+1.4
2,844,985	+		PGA1_c27300	0.26	+0.0
2,845,002	-		PGA1_c27300	0.28	+0.2
2,845,016	+		PGA1_c27300	0.30	+0.3
2,845,024	-		PGA1_c27300	0.30	-0.4
2,845,033	-		PGA1_c27300	0.31	+0.0
2,845,035	+		PGA1_c27300	0.32	-0.3
2,845,047	+		PGA1_c27300	0.33	+0.2
2,845,047	+		PGA1_c27300	0.33	+0.6
2,845,048	-		PGA1_c27300	0.33	+0.8
2,845,055	-		PGA1_c27300	0.34	+1.8
2,845,055	-		PGA1_c27300	0.34	+0.0
2,845,064	-		PGA1_c27300	0.35	-0.4
2,845,093	-		PGA1_c27300	0.38	-0.8
2,845,098	-		PGA1_c27300	0.39	+0.3
2,845,154	+		PGA1_c27300	0.45	-0.4
2,845,167	+		PGA1_c27300	0.47	-0.9
2,845,300	-		PGA1_c27300	0.62	-0.2
2,845,300	-		PGA1_c27300	0.62	+0.0
2,845,368	+		PGA1_c27300	0.70	-1.4
2,845,374	+		PGA1_c27300	0.71	+0.7
2,845,384	+		PGA1_c27300	0.72	-0.5
2,845,392	-		PGA1_c27300	0.73	-1.1
2,845,448	+		PGA1_c27300	0.79	-0.8
2,845,463	+		PGA1_c27300	0.81	+1.1
2,845,471	-		PGA1_c27300	0.82	+1.2
2,845,481	+		PGA1_c27300	0.83	-0.8
2,845,481	+		PGA1_c27300	0.83	-0.4
2,845,524	+		PGA1_c27300	0.88	+0.6
2,845,532	-		PGA1_c27300	0.89	+0.5
2,845,532	-		PGA1_c27300	0.89	-2.1
2,845,541	+				+0.4