Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25190

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,623,240	-		PGA1_c25180	0.53	-1.0
2,623,240	-		PGA1_c25180	0.53	+0.6
2,623,240	-		PGA1_c25180	0.53	-2.1
2,623,247	+		PGA1_c25180	0.54	+0.1
2,623,247	+		PGA1_c25180	0.54	+1.3
2,623,276	-		PGA1_c25180	0.55	-0.3
2,623,329	+		PGA1_c25180	0.58	+0.4
2,623,431	+		PGA1_c25180	0.63	+0.1
2,623,445	-		PGA1_c25180	0.64	+0.8
2,623,541	+		PGA1_c25180	0.68	-0.9
2,623,614	+		PGA1_c25180	0.72	+0.1
2,623,636	-		PGA1_c25180	0.73	-0.0
2,623,839	+		PGA1_c25180	0.84	+0.2
2,623,944	+		PGA1_c25180	0.89	-1.4
2,623,952	-		PGA1_c25180	0.89	+0.1
2,623,954	-		PGA1_c25180	0.89	+0.2
2,624,036	+				+0.5
2,624,077	-				+0.4
2,624,144	-				-0.3
2,624,170	-				+0.6
2,624,209	+				-0.6
2,624,224	-				+0.5
2,624,230	+				+0.4
2,624,250	+				+0.2
2,624,262	+				-0.4
2,624,270	-				+0.2
2,624,307	+		PGA1_c25190	0.12	+1.4
2,624,364	-		PGA1_c25190	0.17	+1.1
2,624,508	+		PGA1_c25190	0.29	-1.0
2,624,561	-		PGA1_c25190	0.34	+0.6
2,624,571	-		PGA1_c25190	0.34	+0.6
2,624,571	-		PGA1_c25190	0.34	+1.1
2,624,587	+		PGA1_c25190	0.36	-0.1
2,624,587	+		PGA1_c25190	0.36	+0.5
2,624,595	-		PGA1_c25190	0.36	-0.7
2,624,669	+		PGA1_c25190	0.43	+0.8
2,624,674	+		PGA1_c25190	0.43	+0.3
2,624,674	+		PGA1_c25190	0.43	-0.1
2,624,797	-		PGA1_c25190	0.54	+0.1
2,624,843	-		PGA1_c25190	0.57	+0.0
2,624,873	-		PGA1_c25190	0.60	-0.7
2,625,046	-		PGA1_c25190	0.75	+0.5
2,625,098	-		PGA1_c25190	0.79	+0.3
2,625,152	-		PGA1_c25190	0.84	-0.5
2,625,217	-		PGA1_c25190	0.89	+0.6
2,625,249	+				+0.4
2,625,254	+				+0.4
2,625,303	-				-1.0
2,625,340	+				+0.2
2,625,347	+				+0.2
2,625,350	-				+0.1
2,625,361	-				+1.0
2,625,392	-				+0.7
2,625,412	-				-0.2
2,625,421	-				+0.4
2,625,427	-				+1.0
2,625,487	-		PGA1_c25200	0.12	-0.6
2,625,492	-		PGA1_c25200	0.13	+0.4
2,625,492	-		PGA1_c25200	0.13	+0.2
2,625,500	+		PGA1_c25200	0.15	+0.0
2,625,505	+		PGA1_c25200	0.15	-0.3
2,625,513	-		PGA1_c25200	0.17	-0.4
2,625,597	-		PGA1_c25200	0.33	-1.1
2,625,632	-		PGA1_c25200	0.39	+1.0
2,625,638	+		PGA1_c25200	0.40	+0.9
2,625,646	-		PGA1_c25200	0.42	+0.2
2,625,654	-		PGA1_c25200	0.44	-0.2
2,625,659	-		PGA1_c25200	0.44	-1.6
2,625,701	+		PGA1_c25200	0.52	-1.2
2,625,731	-		PGA1_c25200	0.58	+0.5
2,625,809	-		PGA1_c25200	0.73	+1.5
2,625,868	-		PGA1_c25200	0.84	-0.0
2,625,875	-		PGA1_c25200	0.85	+0.3
2,625,875	-		PGA1_c25200	0.85	+0.8
2,626,031	-				+0.7
2,626,069	-				-0.8
2,626,071	+				+0.1
2,626,071	+				-0.1
2,626,121	+		PGA1_c25210	0.10	-0.3
2,626,148	-		PGA1_c25210	0.13	-0.4
2,626,154	+		PGA1_c25210	0.14	-0.1
2,626,162	+		PGA1_c25210	0.14	-2.4
2,626,170	-		PGA1_c25210	0.15	+0.8
2,626,172	+		PGA1_c25210	0.15	-0.5
2,626,172	+		PGA1_c25210	0.15	-0.5
2,626,272	-		PGA1_c25210	0.25	-0.0
2,626,311	+		PGA1_c25210	0.29	-0.6
2,626,319	+		PGA1_c25210	0.30	+0.6