Experiment: m.b. Phosphomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2175 and HP15_2176 are separated by 68 nucleotides HP15_2176 and HP15_2177 are separated by 282 nucleotides HP15_2177 and HP15_2178 are separated by 17 nucleotides
HP15_2175: HP15_2175 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 2,286,037 to 2,287,041
_2175
HP15_2176: HP15_2176 - pyruvate kinase II, at 2,287,110 to 2,288,558
_2176
HP15_2177: HP15_2177 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, at 2,288,841 to 2,289,506
_2177
HP15_2178: HP15_2178 - 6-phosphogluconolactonase, at 2,289,524 to 2,290,237
_2178
Position (kb)
2287
2288
2289 Strain fitness (log2 ratio)
-1
0
1
2 at 2286.122 kb on + strand at 2286.147 kb on + strand, within HP15_2175 at 2286.183 kb on + strand, within HP15_2175 at 2286.330 kb on - strand, within HP15_2175 at 2286.362 kb on - strand, within HP15_2175 at 2286.372 kb on + strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.402 kb on - strand, within HP15_2175 at 2286.409 kb on - strand, within HP15_2175 at 2286.421 kb on - strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.529 kb on + strand, within HP15_2175 at 2286.574 kb on + strand, within HP15_2175 at 2286.610 kb on + strand, within HP15_2175 at 2286.612 kb on + strand, within HP15_2175 at 2286.625 kb on - strand, within HP15_2175 at 2286.987 kb on - strand at 2287.023 kb on + strand at 2287.031 kb on - strand at 2287.031 kb on - strand at 2287.318 kb on + strand, within HP15_2176 at 2287.371 kb on + strand, within HP15_2176 at 2287.409 kb on + strand, within HP15_2176 at 2287.451 kb on + strand, within HP15_2176 at 2287.948 kb on - strand, within HP15_2176 at 2287.968 kb on + strand, within HP15_2176 at 2288.191 kb on + strand, within HP15_2176 at 2288.232 kb on - strand, within HP15_2176 at 2288.256 kb on + strand, within HP15_2176 at 2288.295 kb on + strand, within HP15_2176 at 2288.676 kb on + strand at 2288.725 kb on - strand at 2288.767 kb on - strand at 2288.860 kb on + strand at 2288.868 kb on - strand at 2288.952 kb on - strand, within HP15_2177 at 2289.197 kb on + strand, within HP15_2177 at 2289.229 kb on + strand, within HP15_2177 at 2289.285 kb on - strand, within HP15_2177 at 2289.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml remove 2,286,122 + +0.3 2,286,147 + HP15_2175 0.11 +0.4 2,286,183 + HP15_2175 0.15 +0.4 2,286,330 - HP15_2175 0.29 +0.2 2,286,362 - HP15_2175 0.32 +0.2 2,286,372 + HP15_2175 0.33 -0.4 2,286,402 - HP15_2175 0.36 +0.3 2,286,402 - HP15_2175 0.36 +0.4 2,286,409 - HP15_2175 0.37 +0.5 2,286,421 - HP15_2175 0.38 +0.9 2,286,529 + HP15_2175 0.49 +0.0 2,286,529 + HP15_2175 0.49 +1.0 2,286,574 + HP15_2175 0.53 +0.4 2,286,610 + HP15_2175 0.57 +0.4 2,286,612 + HP15_2175 0.57 -0.4 2,286,625 - HP15_2175 0.59 -0.0 2,286,987 - +0.8 2,287,023 + -0.7 2,287,031 - +0.1 2,287,031 - +1.1 2,287,318 + HP15_2176 0.14 +0.7 2,287,371 + HP15_2176 0.18 +1.2 2,287,409 + HP15_2176 0.21 +0.7 2,287,451 + HP15_2176 0.24 +1.6 2,287,948 - HP15_2176 0.58 +0.7 2,287,968 + HP15_2176 0.59 +1.2 2,288,191 + HP15_2176 0.75 +2.3 2,288,232 - HP15_2176 0.77 +1.0 2,288,256 + HP15_2176 0.79 +1.2 2,288,295 + HP15_2176 0.82 +0.6 2,288,676 + +0.2 2,288,725 - +0.2 2,288,767 - -0.2 2,288,860 + +0.2 2,288,868 - +0.2 2,288,952 - HP15_2177 0.17 -0.9 2,289,197 + HP15_2177 0.53 -1.4 2,289,229 + HP15_2177 0.58 -0.9 2,289,285 - HP15_2177 0.67 +0.6 2,289,444 - -1.2
Or see this region's nucleotide sequence