Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20820

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
2,157,769	+		PGA1_c20810	0.43	-0.3
2,157,771	+		PGA1_c20810	0.43	-0.2
2,157,783	+		PGA1_c20810	0.44	+0.7
2,157,803	+		PGA1_c20810	0.46	+0.4
2,157,816	-		PGA1_c20810	0.47	+0.7
2,157,816	-		PGA1_c20810	0.47	-0.2
2,157,831	+		PGA1_c20810	0.48	+0.5
2,157,872	+		PGA1_c20810	0.51	+0.2
2,157,961	-		PGA1_c20810	0.58	-0.7
2,157,994	+		PGA1_c20810	0.61	+0.2
2,158,159	+		PGA1_c20810	0.73	+0.5
2,158,178	+		PGA1_c20810	0.75	-0.0
2,158,322	-		PGA1_c20810	0.86	-1.3
2,158,330	+		PGA1_c20810	0.87	-0.7
2,158,337	+		PGA1_c20810	0.87	-0.8
2,158,356	-		PGA1_c20810	0.89	-0.0
2,158,359	+		PGA1_c20810	0.89	-1.7
2,158,502	+				-0.1
2,158,502	+				-1.7
2,158,564	-				+1.3
2,158,580	+				-0.8
2,158,641	+				+1.0
2,158,666	-				-0.2
2,158,671	-				-0.1
2,158,685	-				+0.2
2,158,713	+				-2.1
2,158,772	-				+0.7
2,158,817	-				+0.1
2,158,843	+		PGA1_c20820	0.14	+0.7
2,158,862	-		PGA1_c20820	0.17	-0.5
2,158,995	-		PGA1_c20820	0.37	-0.9
2,158,997	+		PGA1_c20820	0.37	+0.6
2,159,053	-		PGA1_c20820	0.46	+1.3
2,159,133	+		PGA1_c20820	0.58	+0.4
2,159,182	+		PGA1_c20820	0.66	+0.3
2,159,182	+		PGA1_c20820	0.66	+0.1
2,159,210	+		PGA1_c20820	0.70	+0.1
2,159,210	+		PGA1_c20820	0.70	-0.2
2,159,254	-		PGA1_c20820	0.77	+0.1
2,159,319	-		PGA1_c20820	0.87	+0.2
2,159,361	+				-0.3
2,159,361	+				-0.9
2,159,369	-				-0.2
2,159,470	-				-0.3
2,159,589	-				+0.8
2,159,609	+				+0.0
2,159,630	+				+1.1
2,159,630	+				+0.8
2,159,638	-				-0.6
2,159,659	-				+0.1
2,159,661	+				-0.6
2,159,667	+				+0.5
2,159,754	-		PGA1_c20830	0.21	+0.2
2,159,761	-		PGA1_c20830	0.22	-0.0
2,159,770	+		PGA1_c20830	0.23	-0.2
2,159,790	+		PGA1_c20830	0.25	-0.1
2,159,812	+		PGA1_c20830	0.28	+0.7
2,159,963	+		PGA1_c20830	0.47	+0.4
2,159,971	-		PGA1_c20830	0.48	+0.6
2,160,048	-		PGA1_c20830	0.58	+0.2
2,160,048	-		PGA1_c20830	0.58	+0.2
2,160,133	-		PGA1_c20830	0.69	+0.2
2,160,181	+		PGA1_c20830	0.75	+1.0
2,160,206	+		PGA1_c20830	0.79	+0.2
2,160,237	+		PGA1_c20830	0.83	+0.7
2,160,288	+		PGA1_c20830	0.89	-1.2
2,160,341	+				+1.1
2,160,341	+				-0.8
2,160,345	+				-0.0
2,160,390	+				-1.2
2,160,399	-				+0.2
2,160,401	+				-1.2
2,160,401	+				-0.3