Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17620

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,846,077	-		PGA1_c17610	0.17	+0.1
1,846,082	+		PGA1_c17610	0.17	+1.0
1,846,105	-		PGA1_c17610	0.19	+1.6
1,846,123	-		PGA1_c17610	0.21	-1.2
1,846,186	+		PGA1_c17610	0.26	-0.7
1,846,193	+		PGA1_c17610	0.27	-1.0
1,846,194	-		PGA1_c17610	0.27	-1.2
1,846,268	+		PGA1_c17610	0.34	-0.1
1,846,280	+		PGA1_c17610	0.35	-1.3
1,846,298	-		PGA1_c17610	0.36	-0.4
1,846,298	-		PGA1_c17610	0.36	-0.2
1,846,298	-		PGA1_c17610	0.36	-0.1
1,846,304	+		PGA1_c17610	0.37	-1.9
1,846,304	+		PGA1_c17610	0.37	+1.8
1,846,304	+		PGA1_c17610	0.37	+1.1
1,846,405	+		PGA1_c17610	0.46	+0.0
1,846,413	-		PGA1_c17610	0.47	+0.7
1,846,413	-		PGA1_c17610	0.47	-0.2
1,846,421	-		PGA1_c17610	0.47	+0.3
1,846,510	-		PGA1_c17610	0.55	-0.4
1,846,534	-		PGA1_c17610	0.57	+0.3
1,846,582	+		PGA1_c17610	0.62	-0.1
1,846,590	-		PGA1_c17610	0.62	+0.1
1,846,595	-		PGA1_c17610	0.63	+1.8
1,846,615	+		PGA1_c17610	0.65	-0.5
1,846,623	+		PGA1_c17610	0.65	-1.1
1,846,665	+		PGA1_c17610	0.69	+0.4
1,846,665	+		PGA1_c17610	0.69	-0.2
1,846,665	+		PGA1_c17610	0.69	-0.3
1,846,670	+		PGA1_c17610	0.70	+0.8
1,846,670	+		PGA1_c17610	0.70	+0.2
1,846,670	+		PGA1_c17610	0.70	+0.9
1,846,673	-		PGA1_c17610	0.70	+0.2
1,846,673	-		PGA1_c17610	0.70	-1.1
1,846,673	-		PGA1_c17610	0.70	+0.5
1,846,683	-		PGA1_c17610	0.71	+1.0
1,846,683	-		PGA1_c17610	0.71	+0.4
1,846,691	-		PGA1_c17610	0.71	-0.3
1,846,709	-		PGA1_c17610	0.73	+0.1
1,846,719	-		PGA1_c17610	0.74	+0.2
1,846,752	+		PGA1_c17610	0.77	-0.5
1,846,752	+		PGA1_c17610	0.77	+0.5
1,846,762	+		PGA1_c17610	0.78	+1.4
1,846,770	-		PGA1_c17610	0.78	-0.8
1,846,770	-		PGA1_c17610	0.78	+0.5
1,846,770	-		PGA1_c17610	0.78	+0.2
1,846,793	+		PGA1_c17610	0.80	-0.1
1,846,793	+		PGA1_c17610	0.80	+0.1
1,846,793	+		PGA1_c17610	0.80	+0.1
1,846,793	+		PGA1_c17610	0.80	+2.0
1,846,793	+		PGA1_c17610	0.80	+0.3
1,846,801	-		PGA1_c17610	0.81	+0.4
1,846,801	-		PGA1_c17610	0.81	-0.3
1,846,801	-		PGA1_c17610	0.81	+0.3
1,846,801	-		PGA1_c17610	0.81	-1.2
1,846,801	-		PGA1_c17610	0.81	-0.2
1,846,806	-		PGA1_c17610	0.82	+0.1
1,846,806	-		PGA1_c17610	0.82	+1.4
1,846,870	-		PGA1_c17610	0.87	-0.1
1,846,881	+		PGA1_c17610	0.88	+0.7
1,846,889	-		PGA1_c17610	0.89	+0.3
1,846,956	-				-0.8
1,847,089	+				-0.3
1,847,094	+				+0.9
1,847,109	-				+0.7
1,847,120	-				-0.1
1,847,169	-		PGA1_c17620	0.14	+1.4
1,847,204	-		PGA1_c17620	0.16	-0.2
1,847,284	+		PGA1_c17620	0.23	-0.2
1,847,371	+		PGA1_c17620	0.30	-1.0
1,847,411	-		PGA1_c17620	0.34	-0.2
1,847,416	-		PGA1_c17620	0.34	+0.6
1,847,509	+		PGA1_c17620	0.42	-0.3
1,847,509	+		PGA1_c17620	0.42	-0.5
1,847,527	-		PGA1_c17620	0.44	+0.8
1,847,527	-		PGA1_c17620	0.44	+1.0
1,847,534	+		PGA1_c17620	0.44	+0.6
1,847,579	-		PGA1_c17620	0.48	+0.6
1,847,614	-		PGA1_c17620	0.51	-0.9
1,847,630	+		PGA1_c17620	0.52	+0.3
1,847,630	+		PGA1_c17620	0.52	+0.4
1,847,638	-		PGA1_c17620	0.53	+0.4
1,847,638	-		PGA1_c17620	0.53	+0.7
1,847,675	-		PGA1_c17620	0.56	+0.4
1,847,677	+		PGA1_c17620	0.56	+1.2
1,847,677	+		PGA1_c17620	0.56	+0.8
1,847,685	-		PGA1_c17620	0.57	+0.4
1,847,685	-		PGA1_c17620	0.57	-1.3
1,847,685	-		PGA1_c17620	0.57	+0.1
1,847,685	-		PGA1_c17620	0.57	+0.1
1,847,685	-		PGA1_c17620	0.57	+0.4
1,847,703	+		PGA1_c17620	0.58	-0.4
1,847,703	+		PGA1_c17620	0.58	-1.1
1,847,793	+		PGA1_c17620	0.66	+0.2
1,847,816	-		PGA1_c17620	0.68	+0.6
1,847,855	+		PGA1_c17620	0.71	-0.5
1,847,855	+		PGA1_c17620	0.71	-0.4
1,848,013	+		PGA1_c17620	0.84	-0.5
1,848,013	-		PGA1_c17620	0.84	+0.8
1,848,083	+				+1.3
1,848,083	+				-0.7
1,848,091	-				+0.8
1,848,116	+				+0.2
1,848,134	-				+0.4
1,848,218	+				+0.3
1,848,304	-				-0.1
1,848,304	-				-0.3
1,848,396	+		PGA1_c17630	0.15	+0.8
1,848,396	+		PGA1_c17630	0.15	+0.4
1,848,401	-		PGA1_c17630	0.16	-0.0
1,848,403	+		PGA1_c17630	0.16	-0.5
1,848,407	+		PGA1_c17630	0.17	+0.6
1,848,411	-		PGA1_c17630	0.18	-0.2
1,848,415	+		PGA1_c17630	0.18	+1.2
1,848,415	+		PGA1_c17630	0.18	-2.2
1,848,423	-		PGA1_c17630	0.19	+0.5
1,848,455	-		PGA1_c17630	0.24	-0.0
1,848,495	+		PGA1_c17630	0.30	-1.0
1,848,495	+		PGA1_c17630	0.30	+0.2
1,848,500	+				+1.1
1,848,514	-		PGA1_c17630	0.32	-0.5
1,848,538	+		PGA1_c17630	0.36	+0.7
1,848,642	+		PGA1_c17630	0.51	-0.0
1,848,650	-		PGA1_c17630	0.52	+1.0
1,848,652	+		PGA1_c17630	0.52	-1.8
1,848,652	+		PGA1_c17630	0.52	+0.4
1,848,659	+		PGA1_c17630	0.53	+0.9
1,848,707	-		PGA1_c17630	0.60	+1.0
1,848,707	-		PGA1_c17630	0.60	+0.1
1,848,707	-		PGA1_c17630	0.60	+0.2
1,848,707	-		PGA1_c17630	0.60	-1.2
1,848,726	-		PGA1_c17630	0.63	-0.4
1,848,752	-		PGA1_c17630	0.67	-0.1
1,848,784	+		PGA1_c17630	0.72	-0.4
1,848,819	-		PGA1_c17630	0.77	+0.1
1,848,929	+				+0.7
1,848,929	+				+0.2
1,848,937	-				+0.4
1,849,058	+				-0.1
1,849,067	-				-0.7
1,849,067	-				-0.6
1,849,077	-		PGA1_c17640	0.12	+0.2