Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11360

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,175,027	-		PGA1_c11350	0.77	-1.1
1,175,029	-		PGA1_c11350	0.77	-0.9
1,175,033	+		PGA1_c11350	0.78	-0.7
1,175,042	+		PGA1_c11350	0.78	-0.2
1,175,099	-		PGA1_c11350	0.83	-0.5
1,175,156	+		PGA1_c11350	0.88	+0.1
1,175,164	-		PGA1_c11350	0.89	-0.4
1,175,175	+		PGA1_c11350	0.90	-0.3
1,175,178	-				-0.4
1,175,234	+				-1.1
1,175,261	+				-0.1
1,175,263	+				-0.0
1,175,263	+				-1.0
1,175,269	-				-0.0
1,175,297	-				-0.3
1,175,388	-				+1.1
1,175,390	+				+1.2
1,175,390	+				+0.3
1,175,390	+				+0.1
1,175,398	-				+0.2
1,175,398	-				-1.0
1,175,398	-				-0.1
1,175,398	-				-0.9
1,175,423	+				+0.3
1,175,433	-				-0.7
1,175,469	+				+0.2
1,175,513	+				-0.8
1,175,591	+				-0.2
1,175,622	+				-0.3
1,175,667	+				+0.5
1,175,742	-				+1.5
1,175,774	+				-1.2
1,175,816	+				-1.5
1,175,858	-				-0.4
1,175,863	-				-0.7
1,175,894	-				+0.2
1,175,940	-				-0.3
1,175,950	-				-1.2
1,175,978	+				+0.4
1,175,983	+				-1.0
1,175,983	+				-1.2
1,175,988	+				-0.2
1,175,991	-				+0.2
1,175,991	-				+0.8
1,175,996	-				+0.3
1,176,058	+		PGA1_c11360	0.13	-0.1
1,176,066	-		PGA1_c11360	0.14	-0.1
1,176,066	-		PGA1_c11360	0.14	+0.8
1,176,077	+		PGA1_c11360	0.15	-0.1
1,176,077	+		PGA1_c11360	0.15	+0.1
1,176,077	+		PGA1_c11360	0.15	-0.1
1,176,077	+		PGA1_c11360	0.15	-0.9
1,176,077	+		PGA1_c11360	0.15	-0.5
1,176,077	+		PGA1_c11360	0.15	+0.5
1,176,085	-		PGA1_c11360	0.15	+0.2
1,176,085	-		PGA1_c11360	0.15	+0.7
1,176,085	-		PGA1_c11360	0.15	+0.8
1,176,124	-		PGA1_c11360	0.18	-1.0
1,176,185	+		PGA1_c11360	0.22	+0.5
1,176,338	+		PGA1_c11360	0.33	+0.6
1,176,343	+		PGA1_c11360	0.33	-0.9
1,176,372	+		PGA1_c11360	0.35	+1.6
1,176,375	-		PGA1_c11360	0.35	+0.9
1,176,375	-		PGA1_c11360	0.35	+0.3
1,176,380	-		PGA1_c11360	0.36	+0.2
1,176,387	+		PGA1_c11360	0.36	+0.6
1,176,460	-		PGA1_c11360	0.41	+0.6
1,176,469	+		PGA1_c11360	0.42	+0.9
1,176,571	+		PGA1_c11360	0.49	+0.8
1,176,670	-		PGA1_c11360	0.56	-0.2
1,176,674	+		PGA1_c11360	0.56	+0.6
1,176,680	-		PGA1_c11360	0.57	+0.8
1,176,682	+		PGA1_c11360	0.57	-0.7
1,176,682	-		PGA1_c11360	0.57	-0.1
1,176,749	+		PGA1_c11360	0.61	+0.2
1,176,764	+		PGA1_c11360	0.62	+0.3
1,176,824	-		PGA1_c11360	0.67	-0.4
1,176,836	+		PGA1_c11360	0.67	+0.1
1,176,836	+		PGA1_c11360	0.67	+0.0
1,176,836	+		PGA1_c11360	0.67	+0.5
1,177,141	+		PGA1_c11360	0.89	+0.6
1,177,167	-				+0.6
1,177,204	-				-0.6
1,177,277	+				-0.0
1,177,299	+				-0.3
1,177,359	+				-1.2
1,177,364	+				-0.0
1,177,364	+				-0.6
1,177,364	+				-0.5
1,177,364	+				-0.1
1,177,364	+				+0.1
1,177,364	+				-0.1
1,177,371	+				-1.0
1,177,372	-				-0.9
1,177,372	-				+0.2
1,177,372	-				+0.6
1,177,372	-				-0.1
1,177,372	-				-0.9
1,177,546	-		PGA1_c11370	0.25	+0.6
1,177,605	+		PGA1_c11370	0.32	-0.2
1,177,613	-		PGA1_c11370	0.33	-0.0
1,177,613	-		PGA1_c11370	0.33	+0.2
1,177,651	-		PGA1_c11370	0.37	-0.4
1,177,688	-		PGA1_c11370	0.41	+0.3
1,177,691	+		PGA1_c11370	0.41	+0.4
1,177,724	+		PGA1_c11370	0.45	+0.3
1,177,786	+		PGA1_c11370	0.52	+1.5
1,177,797	+		PGA1_c11370	0.53	-0.2
1,177,799	-		PGA1_c11370	0.53	+0.1
1,177,862	-		PGA1_c11370	0.60	-0.0
1,177,876	+		PGA1_c11370	0.62	-0.0
1,178,015	+		PGA1_c11370	0.77	+1.1
1,178,023	-		PGA1_c11370	0.78	-0.0
1,178,080	+		PGA1_c11370	0.84	-0.7
1,178,115	+		PGA1_c11370	0.88	+0.4
1,178,123	-		PGA1_c11370	0.89	-0.2