Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11320

Experiment: m.b. A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.02 mg/ml
1,169,500	-		PGA1_c11300	0.40	+0.9
1,169,508	-		PGA1_c11300	0.41	-1.8
1,169,513	+		PGA1_c11300	0.42	+0.3
1,169,559	+		PGA1_c11300	0.50	+1.3
1,169,559	+		PGA1_c11300	0.50	-0.6
1,169,564	+		PGA1_c11300	0.51	-0.2
1,169,567	-		PGA1_c11300	0.52	+0.5
1,169,567	-		PGA1_c11300	0.52	-0.1
1,169,599	-		PGA1_c11300	0.57	+0.8
1,169,673	+		PGA1_c11300	0.71	-0.0
1,169,738	+		PGA1_c11300	0.83	-0.5
1,169,827	-				+1.2
1,169,842	-				-0.8
1,169,842	-				+0.2
1,169,844	+				-0.7
1,169,844	+				-0.4
1,169,852	-				+0.5
1,169,876	+				+0.2
1,169,900	-		PGA1_c11310	0.14	-3.6
1,169,949	+		PGA1_c11310	0.24	+0.3
1,169,990	-		PGA1_c11310	0.32	-0.5
1,170,076	+		PGA1_c11310	0.49	-0.2
1,170,159	-		PGA1_c11310	0.66	+0.5
1,170,277	-				+0.0
1,170,282	-				+1.5
1,170,320	+				+0.3
1,170,327	+				-2.5
1,170,332	+				+1.0
1,170,388	+				+0.2
1,170,393	+				+0.1
1,170,443	+				-0.1
1,170,443	+				+0.2
1,170,443	+				-0.1
1,170,461	+				-0.0
1,170,461	+				-0.2
1,170,472	+				-0.2
1,170,485	+				-0.1
1,170,581	+		PGA1_c11320	0.12	+0.2
1,170,586	+		PGA1_c11320	0.13	+1.3
1,170,599	+		PGA1_c11320	0.15	-0.5
1,170,654	+		PGA1_c11320	0.22	+0.7
1,170,686	+		PGA1_c11320	0.26	+0.1
1,170,707	-		PGA1_c11320	0.29	+0.8
1,170,812	+		PGA1_c11320	0.43	-0.0
1,170,896	-		PGA1_c11320	0.54	+0.9
1,170,913	-		PGA1_c11320	0.56	+1.1
1,170,935	-		PGA1_c11320	0.59	+1.5
1,170,973	-		PGA1_c11320	0.64	-0.7
1,170,994	+		PGA1_c11320	0.67	+0.2
1,171,038	-		PGA1_c11320	0.73	-1.1
1,171,191	-				-1.5
1,171,202	-				-0.8
1,171,275	-				+0.2
1,171,311	+				-0.2
1,171,313	+				-1.2
1,171,321	-				-0.8
1,171,321	-				+0.1
1,171,322	+				+0.0
1,171,340	-				+0.2
1,171,370	-				+0.6
1,171,423	+		PGA1_c11330	0.11	+0.3
1,171,454	-		PGA1_c11330	0.15	+0.0
1,171,488	+		PGA1_c11330	0.18	-0.7
1,171,488	+		PGA1_c11330	0.18	-0.5
1,171,488	+		PGA1_c11330	0.18	+0.8
1,171,488	+		PGA1_c11330	0.18	-0.4
1,171,488	+		PGA1_c11330	0.18	-0.5
1,171,488	+		PGA1_c11330	0.18	-0.4
1,171,488	+		PGA1_c11330	0.18	+0.4
1,171,488	+		PGA1_c11330	0.18	-0.5
1,171,496	-		PGA1_c11330	0.19	-0.4
1,171,496	-		PGA1_c11330	0.19	+0.8
1,171,496	-		PGA1_c11330	0.19	+0.8
1,171,503	+		PGA1_c11330	0.20	+0.5
1,171,523	+		PGA1_c11330	0.22	-0.6
1,171,568	+		PGA1_c11330	0.27	+0.6
1,171,568	+		PGA1_c11330	0.27	-0.1
1,171,593	-		PGA1_c11330	0.29	-0.1
1,171,593	-		PGA1_c11330	0.29	-0.3
1,171,605	-		PGA1_c11330	0.31	-0.2
1,171,708	-		PGA1_c11330	0.42	+0.6
1,171,803	+		PGA1_c11330	0.52	-0.5
1,171,811	-		PGA1_c11330	0.52	+0.1
1,171,812	-		PGA1_c11330	0.53	+0.6
1,171,827	+		PGA1_c11330	0.54	+0.3
1,171,830	-		PGA1_c11330	0.54	-1.3
1,171,879	+		PGA1_c11330	0.60	+0.8
1,171,879	+		PGA1_c11330	0.60	+0.1
1,171,892	-		PGA1_c11330	0.61	-1.3
1,171,925	+		PGA1_c11330	0.65	+0.6
1,171,930	+		PGA1_c11330	0.65	-0.3
1,171,933	-		PGA1_c11330	0.65	+0.2
1,171,933	-		PGA1_c11330	0.65	-0.8
1,171,995	-		PGA1_c11330	0.72	+0.1
1,171,995	-		PGA1_c11330	0.72	+0.4
1,172,034	+		PGA1_c11330	0.76	+0.1
1,172,094	-		PGA1_c11330	0.82	-0.7
1,172,104	+		PGA1_c11330	0.83	-0.4
1,172,144	-		PGA1_c11330	0.88	-1.3
1,172,144	-		PGA1_c11330	0.88	-0.2
1,172,151	-		PGA1_c11330	0.88	+0.7
1,172,151	-		PGA1_c11330	0.88	-0.7
1,172,170	+				-1.2
1,172,193	+				+0.1
1,172,193	+				+0.2
1,172,193	+				+0.8
1,172,197	+				-0.2
1,172,201	-				+1.1
1,172,217	+				+0.4
1,172,217	+				-0.2
1,172,222	+				-0.5
1,172,222	+				-0.3
1,172,225	-				+0.9
1,172,225	-				+0.1
1,172,227	+				-0.1
1,172,227	+				-0.3
1,172,227	+				-0.2
1,172,227	+				-0.3
1,172,227	+				+0.3
1,172,227	+				+0.6
1,172,227	+				+0.4
1,172,235	-				+0.3
1,172,235	-				+0.8