Experiment: MoLS4 with L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1803 and DVU1804 overlap by 1 nucleotides DVU1804 and DVU1805 are separated by 199 nucleotides
DVU1803: DVU1803 - glycosyl transferase, group 1 family protein (TIGR), at 1,865,370 to 1,866,458
DVU1803
DVU1804: DVU1804 - glycosyl transferase, group 1 family protein (TIGR), at 1,866,458 to 1,868,257
DVU1804
DVU1805: DVU1805 - GGDEF domain protein (TIGR), at 1,868,457 to 1,869,920
DVU1805
Position (kb)
1866
1867
1868
1869 Strain fitness (log2 ratio)
-2
-1
0
1 at 1865.460 kb on - strand at 1865.516 kb on - strand, within DVU1803 at 1865.722 kb on - strand, within DVU1803 at 1865.727 kb on - strand, within DVU1803 at 1865.775 kb on - strand, within DVU1803 at 1865.961 kb on + strand, within DVU1803 at 1865.971 kb on + strand, within DVU1803 at 1865.971 kb on + strand, within DVU1803 at 1865.971 kb on + strand, within DVU1803 at 1865.971 kb on + strand, within DVU1803 at 1865.984 kb on - strand, within DVU1803 at 1866.118 kb on + strand, within DVU1803 at 1866.166 kb on + strand, within DVU1803 at 1866.201 kb on - strand, within DVU1803 at 1866.226 kb on + strand, within DVU1803 at 1866.309 kb on - strand, within DVU1803 at 1866.382 kb on + strand at 1866.453 kb on + strand at 1866.456 kb on + strand at 1866.536 kb on + strand at 1866.544 kb on - strand at 1866.647 kb on + strand, within DVU1804 at 1866.648 kb on - strand, within DVU1804 at 1866.655 kb on - strand, within DVU1804 at 1866.665 kb on - strand, within DVU1804 at 1866.868 kb on + strand, within DVU1804 at 1866.880 kb on + strand, within DVU1804 at 1866.897 kb on + strand, within DVU1804 at 1866.898 kb on - strand, within DVU1804 at 1866.912 kb on + strand, within DVU1804 at 1866.912 kb on + strand, within DVU1804 at 1866.924 kb on + strand, within DVU1804 at 1866.924 kb on + strand, within DVU1804 at 1866.950 kb on - strand, within DVU1804 at 1866.964 kb on + strand, within DVU1804 at 1866.988 kb on + strand, within DVU1804 at 1867.063 kb on - strand, within DVU1804 at 1867.283 kb on + strand, within DVU1804 at 1867.308 kb on + strand, within DVU1804 at 1867.308 kb on + strand, within DVU1804 at 1867.337 kb on - strand, within DVU1804 at 1867.386 kb on + strand, within DVU1804 at 1867.394 kb on - strand, within DVU1804 at 1867.434 kb on - strand, within DVU1804 at 1867.443 kb on + strand, within DVU1804 at 1867.482 kb on + strand, within DVU1804 at 1867.554 kb on + strand, within DVU1804 at 1867.665 kb on - strand, within DVU1804 at 1867.701 kb on - strand, within DVU1804 at 1867.706 kb on - strand, within DVU1804 at 1867.842 kb on - strand, within DVU1804 at 1867.881 kb on + strand, within DVU1804 at 1867.930 kb on + strand, within DVU1804 at 1868.071 kb on + strand, within DVU1804 at 1868.081 kb on - strand at 1868.081 kb on - strand at 1868.153 kb on + strand at 1868.200 kb on + strand at 1868.208 kb on - strand at 1868.240 kb on - strand at 1868.362 kb on + strand at 1868.445 kb on + strand at 1868.474 kb on - strand at 1868.657 kb on - strand, within DVU1805 at 1868.853 kb on + strand, within DVU1805 at 1868.901 kb on - strand, within DVU1805 at 1868.994 kb on + strand, within DVU1805 at 1869.001 kb on - strand, within DVU1805 at 1869.002 kb on - strand, within DVU1805 at 1869.045 kb on - strand, within DVU1805 at 1869.093 kb on - strand, within DVU1805 at 1869.120 kb on + strand, within DVU1805 at 1869.209 kb on - strand, within DVU1805 at 1869.209 kb on - strand, within DVU1805 at 1869.227 kb on - strand, within DVU1805 at 1869.256 kb on + strand, within DVU1805
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Lysine (N) remove 1,865,460 - -1.7 1,865,516 - DVU1803 0.13 +0.7 1,865,722 - DVU1803 0.32 +0.2 1,865,727 - DVU1803 0.33 -0.2 1,865,775 - DVU1803 0.37 +0.1 1,865,961 + DVU1803 0.54 +0.0 1,865,971 + DVU1803 0.55 +1.1 1,865,971 + DVU1803 0.55 -0.5 1,865,971 + DVU1803 0.55 -0.5 1,865,971 + DVU1803 0.55 -0.2 1,865,984 - DVU1803 0.56 -0.3 1,866,118 + DVU1803 0.69 -0.0 1,866,166 + DVU1803 0.73 -0.3 1,866,201 - DVU1803 0.76 -0.9 1,866,226 + DVU1803 0.79 -1.0 1,866,309 - DVU1803 0.86 -0.1 1,866,382 + +0.2 1,866,453 + +0.2 1,866,456 + -1.5 1,866,536 + -0.8 1,866,544 - +0.1 1,866,647 + DVU1804 0.10 -1.5 1,866,648 - DVU1804 0.11 +0.3 1,866,655 - DVU1804 0.11 +0.8 1,866,665 - DVU1804 0.12 -1.7 1,866,868 + DVU1804 0.23 -1.3 1,866,880 + DVU1804 0.23 +0.7 1,866,897 + DVU1804 0.24 +0.9 1,866,898 - DVU1804 0.24 -0.1 1,866,912 + DVU1804 0.25 -0.6 1,866,912 + DVU1804 0.25 -0.0 1,866,924 + DVU1804 0.26 -0.6 1,866,924 + DVU1804 0.26 -0.6 1,866,950 - DVU1804 0.27 -0.0 1,866,964 + DVU1804 0.28 -1.4 1,866,988 + DVU1804 0.29 -0.5 1,867,063 - DVU1804 0.34 -0.2 1,867,283 + DVU1804 0.46 -0.7 1,867,308 + DVU1804 0.47 -0.8 1,867,308 + DVU1804 0.47 -0.5 1,867,337 - DVU1804 0.49 +0.3 1,867,386 + DVU1804 0.52 +0.4 1,867,394 - DVU1804 0.52 -0.7 1,867,434 - DVU1804 0.54 -0.9 1,867,443 + DVU1804 0.55 -0.0 1,867,482 + DVU1804 0.57 +0.0 1,867,554 + DVU1804 0.61 -0.5 1,867,665 - DVU1804 0.67 +1.5 1,867,701 - DVU1804 0.69 +0.2 1,867,706 - DVU1804 0.69 +0.2 1,867,842 - DVU1804 0.77 -0.1 1,867,881 + DVU1804 0.79 -0.3 1,867,930 + DVU1804 0.82 -0.3 1,868,071 + DVU1804 0.90 -0.6 1,868,081 - -0.0 1,868,081 - +0.2 1,868,153 + +0.2 1,868,200 + -0.8 1,868,208 - -1.7 1,868,240 - -1.6 1,868,362 + -1.4 1,868,445 + -1.8 1,868,474 - -0.6 1,868,657 - DVU1805 0.14 -0.7 1,868,853 + DVU1805 0.27 +0.1 1,868,901 - DVU1805 0.30 +0.2 1,868,994 + DVU1805 0.37 -0.1 1,869,001 - DVU1805 0.37 -0.3 1,869,002 - DVU1805 0.37 -2.0 1,869,045 - DVU1805 0.40 -0.0 1,869,093 - DVU1805 0.43 +0.6 1,869,120 + DVU1805 0.45 -0.5 1,869,209 - DVU1805 0.51 -0.0 1,869,209 - DVU1805 0.51 -0.3 1,869,227 - DVU1805 0.53 +0.1 1,869,256 + DVU1805 0.55 -0.5
Or see this region's nucleotide sequence