Experiment: MoLS4 with L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dxr and DVU0867 overlap by 4 nucleotides DVU0867 and cdsA are separated by 8 nucleotides cdsA and uppS overlap by 4 nucleotides
DVU0866: dxr - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (TIGR), at 958,392 to 959,618
dxr
DVU0867: DVU0867 - aromatic amino acid decarboxylase, putative (TIGR), at 959,615 to 961,108
DVU0867
DVU0868: cdsA - phosphatidate cytidylyltransferase (TIGR), at 961,117 to 961,923
cdsA
DVU0869: uppS - undecaprenyl diphosphate synthase (TIGR), at 961,920 to 962,663
uppS
Position (kb) 959
960
961
962 Strain fitness (log2 ratio) -1
0
1 at 959.808 kb on + strand, within DVU0867 at 959.929 kb on - strand, within DVU0867 at 960.096 kb on + strand, within DVU0867 at 960.125 kb on + strand, within DVU0867 at 960.243 kb on - strand, within DVU0867 at 960.269 kb on + strand, within DVU0867 at 960.277 kb on - strand, within DVU0867 at 960.293 kb on + strand, within DVU0867 at 960.368 kb on - strand, within DVU0867 at 960.378 kb on + strand, within DVU0867 at 960.386 kb on - strand, within DVU0867 at 960.386 kb on - strand, within DVU0867 at 960.386 kb on - strand, within DVU0867 at 960.446 kb on + strand, within DVU0867 at 960.721 kb on + strand, within DVU0867 at 960.738 kb on - strand, within DVU0867 at 960.780 kb on + strand, within DVU0867 at 960.783 kb on - strand, within DVU0867 at 960.819 kb on - strand, within DVU0867
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Lysine (N) remove 959,808 + DVU0867 0.13 +0.0 959,929 - DVU0867 0.21 -0.3 960,096 + DVU0867 0.32 -0.1 960,125 + DVU0867 0.34 -1.0 960,243 - DVU0867 0.42 +0.0 960,269 + DVU0867 0.44 -0.4 960,277 - DVU0867 0.44 -0.1 960,293 + DVU0867 0.45 +0.6 960,368 - DVU0867 0.50 +0.9 960,378 + DVU0867 0.51 -0.2 960,386 - DVU0867 0.52 +0.5 960,386 - DVU0867 0.52 +0.4 960,386 - DVU0867 0.52 +0.5 960,446 + DVU0867 0.56 -0.8 960,721 + DVU0867 0.74 +1.1 960,738 - DVU0867 0.75 -0.5 960,780 + DVU0867 0.78 +1.5 960,783 - DVU0867 0.78 -1.7 960,819 - DVU0867 0.81 +1.5
Or see this region's nucleotide sequence