Experiment: MoLS4 with L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QmoC and DVU0851 are separated by 89 nucleotides DVU0851 and DVU0852 are separated by 213 nucleotides
DVU0850: QmoC - Quinone-interacting membrane-bound oxidoreductase (Shelley Haveman), at 939,296 to 940,450
QmoC
DVU0851: DVU0851 - hypothetical protein (TIGR), at 940,540 to 941,286
DVU0851
DVU0852: DVU0852 - extracellular solute-binding protein, putative (TIGR), at 941,500 to 942,297
DVU0852
Position (kb) 940
941
942 Strain fitness (log2 ratio) -1
0
1 at 941.346 kb on + strand at 941.470 kb on + strand at 941.628 kb on + strand, within DVU0852 at 941.636 kb on - strand, within DVU0852 at 941.670 kb on - strand, within DVU0852 at 941.708 kb on + strand, within DVU0852 at 941.716 kb on - strand, within DVU0852 at 941.748 kb on - strand, within DVU0852 at 941.748 kb on - strand, within DVU0852 at 941.821 kb on + strand, within DVU0852 at 941.821 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.899 kb on + strand, within DVU0852 at 941.907 kb on - strand, within DVU0852 at 941.924 kb on - strand, within DVU0852 at 941.924 kb on - strand, within DVU0852 at 941.965 kb on + strand, within DVU0852 at 941.975 kb on - strand, within DVU0852 at 942.060 kb on + strand, within DVU0852 at 942.069 kb on + strand, within DVU0852 at 942.113 kb on - strand, within DVU0852 at 942.129 kb on + strand, within DVU0852 at 942.137 kb on - strand, within DVU0852
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Lysine (N) remove 941,346 + -1.0 941,470 + -0.2 941,628 + DVU0852 0.16 -0.1 941,636 - DVU0852 0.17 -1.2 941,670 - DVU0852 0.21 +0.1 941,708 + DVU0852 0.26 -0.7 941,716 - DVU0852 0.27 -1.6 941,748 - DVU0852 0.31 -0.8 941,748 - DVU0852 0.31 -1.3 941,821 + DVU0852 0.40 -1.4 941,821 + DVU0852 0.40 +0.1 941,899 + DVU0852 0.50 +0.1 941,899 + DVU0852 0.50 +0.2 941,899 + DVU0852 0.50 -0.5 941,907 - DVU0852 0.51 +1.1 941,924 - DVU0852 0.53 +1.1 941,924 - DVU0852 0.53 -0.8 941,965 + DVU0852 0.58 -0.7 941,975 - DVU0852 0.60 -0.1 942,060 + DVU0852 0.70 -0.4 942,069 + DVU0852 0.71 +0.0 942,113 - DVU0852 0.77 -0.6 942,129 + DVU0852 0.79 -0.7 942,137 - DVU0852 0.80 +0.0
Or see this region's nucleotide sequence