Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_828 and HP15_829 are separated by 48 nucleotides HP15_829 and HP15_830 are separated by 353 nucleotides HP15_830 and HP15_831 are separated by 2 nucleotides
HP15_828: HP15_828 - conserved hypothetical protein, at 845,204 to 846,595
_828
HP15_829: HP15_829 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 846,644 to 848,146
_829
HP15_830: HP15_830 - conserved hypothetical protein, at 848,500 to 849,003
_830
HP15_831: HP15_831 - protein containing glutaredoxin domain, at 849,006 to 849,806
_831
Position (kb) 846
847
848
849 Strain fitness (log2 ratio) -1
0
1 at 845.645 kb on - strand, within HP15_828 at 845.694 kb on + strand, within HP15_828 at 845.814 kb on + strand, within HP15_828 at 845.924 kb on + strand, within HP15_828 at 845.924 kb on + strand, within HP15_828 at 845.932 kb on - strand, within HP15_828 at 845.956 kb on - strand, within HP15_828 at 846.099 kb on - strand, within HP15_828 at 846.157 kb on - strand, within HP15_828 at 846.172 kb on + strand, within HP15_828 at 846.426 kb on - strand, within HP15_828 at 846.475 kb on + strand at 846.493 kb on - strand at 846.563 kb on - strand at 846.592 kb on + strand at 846.658 kb on + strand at 847.345 kb on + strand, within HP15_829 at 847.502 kb on - strand, within HP15_829 at 847.536 kb on + strand, within HP15_829 at 847.763 kb on - strand, within HP15_829 at 848.017 kb on + strand at 848.534 kb on - strand at 848.608 kb on + strand, within HP15_830 at 848.608 kb on + strand, within HP15_830 at 848.733 kb on + strand, within HP15_830 at 848.956 kb on - strand at 848.956 kb on - strand at 848.958 kb on + strand at 848.966 kb on - strand at 848.966 kb on - strand at 848.966 kb on - strand at 848.966 kb on - strand at 849.107 kb on - strand, within HP15_831
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 845,645 - HP15_828 0.32 +0.1 845,694 + HP15_828 0.35 +0.2 845,814 + HP15_828 0.44 -0.2 845,924 + HP15_828 0.52 -0.7 845,924 + HP15_828 0.52 +0.6 845,932 - HP15_828 0.52 +0.3 845,956 - HP15_828 0.54 -0.1 846,099 - HP15_828 0.64 +1.0 846,157 - HP15_828 0.68 +0.9 846,172 + HP15_828 0.70 -0.5 846,426 - HP15_828 0.88 -0.2 846,475 + +0.6 846,493 - -0.3 846,563 - -0.1 846,592 + +0.1 846,658 + -0.4 847,345 + HP15_829 0.47 -1.1 847,502 - HP15_829 0.57 -0.6 847,536 + HP15_829 0.59 -1.4 847,763 - HP15_829 0.74 -1.1 848,017 + -0.8 848,534 - +1.0 848,608 + HP15_830 0.21 +0.4 848,608 + HP15_830 0.21 -0.1 848,733 + HP15_830 0.46 +0.9 848,956 - -1.0 848,956 - -0.3 848,958 + -0.4 848,966 - -0.2 848,966 - +0.3 848,966 - +0.1 848,966 - +0.2 849,107 - HP15_831 0.13 +0.1
Or see this region's nucleotide sequence