Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_611 and HP15_612 are separated by 252 nucleotides HP15_612 and HP15_613 are separated by 443 nucleotides
HP15_611: HP15_611 - diguanylate cyclase, at 631,145 to 632,236
_611
HP15_612: HP15_612 - unusual protein kinase, at 632,489 to 633,934
_612
HP15_613: HP15_613 - methyl-accepting chemotaxis sensory transducer, at 634,378 to 636,504
_613
Position (kb) 632
633
634 Strain fitness (log2 ratio) -2
-1
0
1
2 at 631.523 kb on - strand, within HP15_611 at 631.523 kb on - strand, within HP15_611 at 631.523 kb on - strand, within HP15_611 at 631.533 kb on - strand, within HP15_611 at 631.747 kb on - strand, within HP15_611 at 631.858 kb on + strand, within HP15_611 at 631.866 kb on - strand, within HP15_611 at 631.983 kb on - strand, within HP15_611 at 632.120 kb on + strand, within HP15_611 at 632.354 kb on - strand at 632.550 kb on + strand at 632.563 kb on - strand at 632.731 kb on + strand, within HP15_612 at 632.731 kb on + strand, within HP15_612 at 632.883 kb on - strand, within HP15_612 at 633.263 kb on - strand, within HP15_612 at 633.282 kb on - strand, within HP15_612 at 633.419 kb on + strand, within HP15_612 at 633.419 kb on + strand, within HP15_612 at 633.460 kb on + strand, within HP15_612 at 633.463 kb on - strand, within HP15_612 at 633.879 kb on - strand at 633.922 kb on - strand at 634.166 kb on + strand at 634.170 kb on + strand at 634.178 kb on + strand at 634.217 kb on + strand at 634.225 kb on - strand at 634.225 kb on - strand at 634.356 kb on - strand at 634.420 kb on - strand at 634.483 kb on + strand at 634.508 kb on + strand at 634.519 kb on + strand at 634.527 kb on - strand at 634.545 kb on - strand at 634.655 kb on + strand, within HP15_613 at 634.691 kb on + strand, within HP15_613 at 634.740 kb on - strand, within HP15_613 at 634.790 kb on + strand, within HP15_613
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 631,523 - HP15_611 0.35 -0.0 631,523 - HP15_611 0.35 -0.6 631,523 - HP15_611 0.35 +0.2 631,533 - HP15_611 0.36 -0.3 631,747 - HP15_611 0.55 -0.2 631,858 + HP15_611 0.65 +0.4 631,866 - HP15_611 0.66 -0.4 631,983 - HP15_611 0.77 -0.2 632,120 + HP15_611 0.89 +0.7 632,354 - -0.5 632,550 + -0.0 632,563 - -0.6 632,731 + HP15_612 0.17 +0.2 632,731 + HP15_612 0.17 -0.6 632,883 - HP15_612 0.27 -0.7 633,263 - HP15_612 0.54 -0.9 633,282 - HP15_612 0.55 -0.3 633,419 + HP15_612 0.64 -1.8 633,419 + HP15_612 0.64 -0.2 633,460 + HP15_612 0.67 +0.1 633,463 - HP15_612 0.67 +0.9 633,879 - -0.1 633,922 - +0.2 634,166 + +0.7 634,170 + +0.9 634,178 + +0.1 634,217 + +0.0 634,225 - +0.3 634,225 - -0.6 634,356 - +0.0 634,420 - +0.1 634,483 + +1.5 634,508 + +0.2 634,519 + +2.6 634,527 - -0.2 634,545 - +0.8 634,655 + HP15_613 0.13 +0.2 634,691 + HP15_613 0.15 -0.2 634,740 - HP15_613 0.17 -1.2 634,790 + HP15_613 0.19 -0.5
Or see this region's nucleotide sequence