Strain Fitness in Marinobacter adhaerens HP15 around HP15_4068

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4067 and HP15_4068 are separated by 32 nucleotidesHP15_4068 and HP15_4069 are separated by 4 nucleotidesHP15_4069 and HP15_4070 are separated by 62 nucleotides HP15_4067: HP15_4067 - spermidine/putrescine ABC transporter ATPase subunit, at 4,301,705 to 4,302,793 _4067 HP15_4068: HP15_4068 - binding-protein-dependent transport systems inner membrane component, at 4,302,826 to 4,303,650 _4068 HP15_4069: HP15_4069 - binding-protein-dependent transport systems inner membrane component, at 4,303,655 to 4,304,506 _4069 HP15_4070: HP15_4070 - antibiotic biosynthesis monooxygenase family enzyme, at 4,304,569 to 4,304,883 _4070 Position (kb) 4302 4303 4304Strain fitness (log2 ratio) -2 -1 0 1 2at 4302.109 kb on + strand, within HP15_4067at 4302.114 kb on - strand, within HP15_4067at 4302.155 kb on - strand, within HP15_4067at 4302.201 kb on + strand, within HP15_4067at 4302.228 kb on - strand, within HP15_4067at 4302.232 kb on + strand, within HP15_4067at 4302.289 kb on + strand, within HP15_4067at 4302.289 kb on + strand, within HP15_4067at 4302.360 kb on + strand, within HP15_4067at 4302.454 kb on - strand, within HP15_4067at 4302.483 kb on - strand, within HP15_4067at 4302.491 kb on + strand, within HP15_4067at 4302.491 kb on + strand, within HP15_4067at 4302.496 kb on + strand, within HP15_4067at 4302.542 kb on - strand, within HP15_4067at 4302.578 kb on + strand, within HP15_4067at 4302.590 kb on + strand, within HP15_4067at 4302.617 kb on + strand, within HP15_4067at 4302.634 kb on - strand, within HP15_4067at 4302.660 kb on - strand, within HP15_4067at 4302.816 kb on + strandat 4302.843 kb on + strandat 4302.898 kb on + strandat 4302.937 kb on - strand, within HP15_4068at 4302.943 kb on - strand, within HP15_4068at 4302.983 kb on + strand, within HP15_4068at 4303.051 kb on + strand, within HP15_4068at 4303.072 kb on + strand, within HP15_4068at 4303.109 kb on + strand, within HP15_4068at 4303.151 kb on - strand, within HP15_4068at 4303.201 kb on + strand, within HP15_4068at 4303.201 kb on + strand, within HP15_4068at 4303.275 kb on - strand, within HP15_4068at 4303.310 kb on + strand, within HP15_4068at 4303.324 kb on + strand, within HP15_4068at 4303.370 kb on + strand, within HP15_4068at 4303.395 kb on + strand, within HP15_4068at 4303.403 kb on - strand, within HP15_4068at 4303.403 kb on - strand, within HP15_4068at 4303.491 kb on - strand, within HP15_4068at 4303.553 kb on + strand, within HP15_4068at 4303.553 kb on + strand, within HP15_4068at 4303.561 kb on - strand, within HP15_4068at 4303.567 kb on - strand, within HP15_4068at 4303.622 kb on - strandat 4303.670 kb on - strandat 4303.771 kb on - strand, within HP15_4069at 4303.803 kb on + strand, within HP15_4069at 4303.833 kb on + strand, within HP15_4069at 4303.840 kb on + strand, within HP15_4069at 4303.916 kb on + strand, within HP15_4069at 4303.929 kb on - strand, within HP15_4069at 4303.929 kb on - strand, within HP15_4069at 4303.931 kb on + strand, within HP15_4069at 4303.931 kb on + strand, within HP15_4069at 4303.931 kb on + strand, within HP15_4069at 4303.931 kb on + strand, within HP15_4069at 4303.939 kb on - strand, within HP15_4069at 4303.939 kb on - strand, within HP15_4069at 4303.972 kb on + strand, within HP15_4069at 4303.972 kb on + strand, within HP15_4069at 4304.033 kb on + strand, within HP15_4069at 4304.054 kb on - strand, within HP15_4069at 4304.097 kb on - strand, within HP15_4069at 4304.131 kb on - strand, within HP15_4069at 4304.131 kb on - strand, within HP15_4069at 4304.165 kb on + strand, within HP15_4069at 4304.173 kb on - strand, within HP15_4069at 4304.173 kb on - strand, within HP15_4069at 4304.228 kb on + strand, within HP15_4069at 4304.236 kb on - strand, within HP15_4069at 4304.236 kb on - strand, within HP15_4069at 4304.393 kb on + strand, within HP15_4069at 4304.393 kb on - strand, within HP15_4069at 4304.395 kb on + strand, within HP15_4069at 4304.403 kb on - strand, within HP15_4069at 4304.403 kb on - strand, within HP15_4069at 4304.490 kb on - strandat 4304.542 kb on - strandat 4304.587 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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4,302,109 + HP15_4067 0.37 -0.7
4,302,114 - HP15_4067 0.38 -0.7
4,302,155 - HP15_4067 0.41 -0.3
4,302,201 + HP15_4067 0.46 +0.6
4,302,228 - HP15_4067 0.48 -1.0
4,302,232 + HP15_4067 0.48 -0.7
4,302,289 + HP15_4067 0.54 -0.2
4,302,289 + HP15_4067 0.54 -0.1
4,302,360 + HP15_4067 0.60 -1.1
4,302,454 - HP15_4067 0.69 -0.5
4,302,483 - HP15_4067 0.71 -0.3
4,302,491 + HP15_4067 0.72 +0.3
4,302,491 + HP15_4067 0.72 +0.0
4,302,496 + HP15_4067 0.73 -2.2
4,302,542 - HP15_4067 0.77 +0.8
4,302,578 + HP15_4067 0.80 -1.2
4,302,590 + HP15_4067 0.81 -0.5
4,302,617 + HP15_4067 0.84 -0.3
4,302,634 - HP15_4067 0.85 +0.8
4,302,660 - HP15_4067 0.88 -0.2
4,302,816 + -0.3
4,302,843 + +0.2
4,302,898 + +0.2
4,302,937 - HP15_4068 0.13 -1.6
4,302,943 - HP15_4068 0.14 +0.4
4,302,983 + HP15_4068 0.19 -1.1
4,303,051 + HP15_4068 0.27 -0.0
4,303,072 + HP15_4068 0.30 +0.2
4,303,109 + HP15_4068 0.34 -0.6
4,303,151 - HP15_4068 0.39 -1.1
4,303,201 + HP15_4068 0.45 -0.4
4,303,201 + HP15_4068 0.45 -0.7
4,303,275 - HP15_4068 0.54 +2.1
4,303,310 + HP15_4068 0.59 +0.5
4,303,324 + HP15_4068 0.60 -0.5
4,303,370 + HP15_4068 0.66 -0.8
4,303,395 + HP15_4068 0.69 +1.6
4,303,403 - HP15_4068 0.70 -0.4
4,303,403 - HP15_4068 0.70 -0.5
4,303,491 - HP15_4068 0.81 -0.9
4,303,553 + HP15_4068 0.88 -0.2
4,303,553 + HP15_4068 0.88 -0.2
4,303,561 - HP15_4068 0.89 +0.2
4,303,567 - HP15_4068 0.90 +1.1
4,303,622 - -0.5
4,303,670 - -0.7
4,303,771 - HP15_4069 0.14 -0.4
4,303,803 + HP15_4069 0.17 +0.3
4,303,833 + HP15_4069 0.21 -0.2
4,303,840 + HP15_4069 0.22 -0.3
4,303,916 + HP15_4069 0.31 -0.2
4,303,929 - HP15_4069 0.32 -1.3
4,303,929 - HP15_4069 0.32 -1.1
4,303,931 + HP15_4069 0.32 -0.2
4,303,931 + HP15_4069 0.32 -0.5
4,303,931 + HP15_4069 0.32 -0.2
4,303,931 + HP15_4069 0.32 -0.2
4,303,939 - HP15_4069 0.33 -0.6
4,303,939 - HP15_4069 0.33 -0.6
4,303,972 + HP15_4069 0.37 -0.7
4,303,972 + HP15_4069 0.37 -0.5
4,304,033 + HP15_4069 0.44 +0.2
4,304,054 - HP15_4069 0.47 -0.1
4,304,097 - HP15_4069 0.52 +0.2
4,304,131 - HP15_4069 0.56 -0.1
4,304,131 - HP15_4069 0.56 -0.3
4,304,165 + HP15_4069 0.60 +0.3
4,304,173 - HP15_4069 0.61 +0.0
4,304,173 - HP15_4069 0.61 +0.8
4,304,228 + HP15_4069 0.67 -0.5
4,304,236 - HP15_4069 0.68 +0.2
4,304,236 - HP15_4069 0.68 -0.5
4,304,393 + HP15_4069 0.87 -1.3
4,304,393 - HP15_4069 0.87 +1.1
4,304,395 + HP15_4069 0.87 +0.5
4,304,403 - HP15_4069 0.88 -2.6
4,304,403 - HP15_4069 0.88 +0.5
4,304,490 - -0.1
4,304,542 - +0.6
4,304,587 - +0.6

Or see this region's nucleotide sequence