Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33140

Experiment: m.b. Cephalothin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.001 mg/ml
3,474,393	+		PGA1_c33130	0.60	+0.5
3,474,393	+		PGA1_c33130	0.60	+0.4
3,474,393	+		PGA1_c33130	0.60	+0.2
3,474,401	-		PGA1_c33130	0.60	+0.0
3,474,524	+		PGA1_c33130	0.65	+0.4
3,474,532	+		PGA1_c33130	0.66	+0.8
3,474,532	-		PGA1_c33130	0.66	-0.6
3,474,532	-		PGA1_c33130	0.66	+0.7
3,474,540	-		PGA1_c33130	0.66	+0.5
3,474,545	-		PGA1_c33130	0.66	-0.1
3,474,552	+		PGA1_c33130	0.66	+0.3
3,474,552	+		PGA1_c33130	0.66	-0.5
3,474,563	+		PGA1_c33130	0.67	+1.4
3,474,599	-		PGA1_c33130	0.68	-0.3
3,474,630	+		PGA1_c33130	0.70	+1.0
3,474,642	-		PGA1_c33130	0.70	+0.6
3,474,642	-		PGA1_c33130	0.70	+0.1
3,474,642	-		PGA1_c33130	0.70	-0.9
3,474,664	+		PGA1_c33130	0.71	+0.6
3,474,694	+		PGA1_c33130	0.72	+0.1
3,474,694	+		PGA1_c33130	0.72	-0.5
3,474,694	+		PGA1_c33130	0.72	-0.1
3,474,694	+		PGA1_c33130	0.72	-1.1
3,474,702	-		PGA1_c33130	0.73	+1.2
3,474,704	+		PGA1_c33130	0.73	-0.1
3,474,728	-		PGA1_c33130	0.74	-1.5
3,474,738	+		PGA1_c33130	0.74	+0.8
3,474,769	-		PGA1_c33130	0.75	+0.0
3,474,856	-		PGA1_c33130	0.79	+0.7
3,474,887	+		PGA1_c33130	0.80	+0.0
3,474,887	+		PGA1_c33130	0.80	+0.6
3,474,887	+		PGA1_c33130	0.80	+0.1
3,474,895	-		PGA1_c33130	0.80	-0.0
3,474,895	-		PGA1_c33130	0.80	+0.9
3,474,895	-		PGA1_c33130	0.80	-1.4
3,474,895	-		PGA1_c33130	0.80	-0.2
3,474,895	-		PGA1_c33130	0.80	-0.2
3,474,895	-		PGA1_c33130	0.80	-0.5
3,474,895	-		PGA1_c33130	0.80	+0.4
3,474,895	-		PGA1_c33130	0.80	-1.4
3,474,938	+		PGA1_c33130	0.82	-1.2
3,474,938	+		PGA1_c33130	0.82	+0.7
3,474,946	+		PGA1_c33130	0.82	+0.1
3,474,989	+		PGA1_c33130	0.84	+0.2
3,474,990	+		PGA1_c33130	0.84	+0.7
3,474,999	+		PGA1_c33130	0.85	+0.6
3,475,007	-		PGA1_c33130	0.85	+0.3
3,475,007	-		PGA1_c33130	0.85	+0.1
3,475,012	-		PGA1_c33130	0.85	-1.0
3,475,036	-		PGA1_c33130	0.86	+0.4
3,475,094	-		PGA1_c33130	0.89	-0.0
3,475,100	+		PGA1_c33130	0.89	-0.4
3,475,108	-		PGA1_c33130	0.89	-0.6
3,475,118	-		PGA1_c33130	0.90	-0.5
3,475,141	+				+0.7
3,475,141	+				-0.4
3,475,141	+				-0.2
3,475,149	-				+0.5
3,475,174	-				-0.3
3,475,318	+				-0.1
3,475,326	-				-1.3
3,475,326	-				-0.4
3,475,436	-		PGA1_c33140	0.12	+0.1
3,475,457	-		PGA1_c33140	0.18	-0.3
3,475,498	+		PGA1_c33140	0.29	+0.1
3,475,506	-		PGA1_c33140	0.31	-0.8
3,475,522	-		PGA1_c33140	0.35	-0.1
3,475,566	-		PGA1_c33140	0.47	-1.3
3,475,577	-		PGA1_c33140	0.50	-0.3
3,475,596	-		PGA1_c33140	0.55	-1.3
3,475,636	+		PGA1_c33140	0.66	+0.0
3,475,636	+		PGA1_c33140	0.66	-0.2
3,475,636	+		PGA1_c33140	0.66	+0.2
3,475,636	+		PGA1_c33140	0.66	+0.2
3,475,636	+		PGA1_c33140	0.66	-2.1
3,475,636	+		PGA1_c33140	0.66	-1.0
3,475,636	+		PGA1_c33140	0.66	+0.4
3,475,636	+		PGA1_c33140	0.66	+0.3
3,475,644	-		PGA1_c33140	0.68	-3.3
3,475,644	-		PGA1_c33140	0.68	-1.0
3,475,644	-		PGA1_c33140	0.68	+0.2
3,475,644	-		PGA1_c33140	0.68	-0.4
3,475,644	-		PGA1_c33140	0.68	+0.1
3,475,644	-		PGA1_c33140	0.68	+0.0
3,475,644	-		PGA1_c33140	0.68	-0.5
3,475,703	+		PGA1_c33140	0.84	-0.9
3,475,752	+				+0.4
3,475,752	-				-0.1
3,475,759	-				-0.1
3,475,760	-				+0.2
3,475,760	-				-0.6
3,475,801	-				-0.1
3,475,837	-		PGA1_c33150	0.12	-0.8
3,475,844	-		PGA1_c33150	0.13	+0.6
3,475,845	-		PGA1_c33150	0.14	-1.0
3,475,860	-		PGA1_c33150	0.16	-0.5
3,475,884	+		PGA1_c33150	0.20	-0.5
3,475,889	+		PGA1_c33150	0.21	-0.3
3,475,889	+		PGA1_c33150	0.21	+0.2
3,475,897	-		PGA1_c33150	0.22	+0.2
3,475,923	-		PGA1_c33150	0.26	-0.7
3,475,925	+		PGA1_c33150	0.26	-0.5
3,475,938	-		PGA1_c33150	0.28	+0.3
3,475,938	-		PGA1_c33150	0.28	+1.0
3,475,938	-		PGA1_c33150	0.28	+0.4
3,475,943	+		PGA1_c33150	0.29	-1.8
3,475,943	+		PGA1_c33150	0.29	-0.5
3,475,951	-		PGA1_c33150	0.30	+0.2
3,475,957	+		PGA1_c33150	0.31	+0.1
3,475,957	+		PGA1_c33150	0.31	-2.0
3,476,127	+		PGA1_c33150	0.58	+0.6
3,476,127	+		PGA1_c33150	0.58	-0.1
3,476,127	+		PGA1_c33150	0.58	+0.1
3,476,127	+		PGA1_c33150	0.58	-0.1
3,476,135	-		PGA1_c33150	0.60	+0.2
3,476,135	-		PGA1_c33150	0.60	+1.5
3,476,135	-		PGA1_c33150	0.60	-1.6
3,476,135	-		PGA1_c33150	0.60	-0.7
3,476,158	-		PGA1_c33150	0.63	-0.3
3,476,244	+		PGA1_c33150	0.77	+0.5
3,476,254	+		PGA1_c33150	0.79	+0.5
3,476,257	-		PGA1_c33150	0.79	-2.0
3,476,278	+		PGA1_c33150	0.82	-1.3
3,476,283	+		PGA1_c33150	0.83	-1.3
3,476,284	+		PGA1_c33150	0.83	+0.1
3,476,292	-		PGA1_c33150	0.85	-0.8
3,476,325	+		PGA1_c33150	0.90	+0.4
3,476,325	+		PGA1_c33150	0.90	+0.1
3,476,333	-				-0.2
3,476,333	-				-0.8
3,476,346	-				+1.2
3,476,348	+				-0.1
3,476,376	+				+0.3
3,476,376	+				-1.2
3,476,376	-				+0.6
3,476,384	-				+0.0
3,476,384	-				+1.7
3,476,386	+				-0.5
3,476,386	+				-0.5
3,476,394	-				-0.0
3,476,394	-				+1.2
3,476,489	+		PGA1_c33160	0.18	-0.1
3,476,555	-		PGA1_c33160	0.29	-0.0
3,476,572	+		PGA1_c33160	0.32	+0.0
3,476,636	+		PGA1_c33160	0.44	-0.8
3,476,644	-		PGA1_c33160	0.45	-1.7
3,476,644	-		PGA1_c33160	0.45	+0.6
3,476,644	-		PGA1_c33160	0.45	+0.9
3,476,677	+		PGA1_c33160	0.51	+0.6
3,476,680	-		PGA1_c33160	0.51	+0.2
3,476,710	+		PGA1_c33160	0.56	-0.3
3,476,710	+		PGA1_c33160	0.56	-0.3
3,476,710	+		PGA1_c33160	0.56	-0.2
3,476,710	+		PGA1_c33160	0.56	-1.5
3,476,715	+		PGA1_c33160	0.57	-1.7
3,476,716	-		PGA1_c33160	0.58	-0.3
3,476,718	-		PGA1_c33160	0.58	+0.0
3,476,723	-		PGA1_c33160	0.59	+0.1
3,476,760	+		PGA1_c33160	0.65	-2.0